Streptomyces explomaris: SLV14_001968
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Entry
SLV14_001968 CDS
T11122
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sexp Streptomyces explomaris
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sexp03021
]
SLV14_001968
Transcription machinery [BR:
sexp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLV14_001968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_23
PF0610-like_N
HTH_5
MarR
HTH_27
HTH_3
IF2_N
Motif
Other DBs
NCBI-ProteinID:
UYB44716
LinkDB
All DBs
Position
complement(2306424..2307284)
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AA seq
286 aa
AA seq
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MQAPCDAPSPRAGRYSTTLPRIEDTGSVTPHDAKALTPLFFERLAELEEGTPEYQYARNT
LIEMNLSLVRYVASRYRSHSDQMEDIVQVGTIGLIKAIDRFDLSRRTDFAAFAIPHVLGE
IKRFFRDTSWAVHVPRRLQELRIDLAQAMEHLSALLDREPTVKELAEHLQLTEEEIIEGI
VAGNGYTAVSLHLSCDSEATQGAGAPAFADLLGATDPATEHVEDRYALASLLEQLGERDR
LIVHLRFDREMTQAQIGTVLGISQMHVSRLLARIIKQLRKGMLGQQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
ctgcaggcgccttgtgacgccccgtcaccgcgagccggaagatattccaccacgcttccg
cgcatcgaggacaccggaagtgtgactccccatgacgccaaggcgctgacgccgctgttc
ttcgagcggctcgcggagctcgaagagggcactcccgagtatcagtacgcccgcaatacg
ctcatcgagatgaacttgtccctggtgcgctatgtggcctcccggtacagaagccacagt
gaccaaatggaggacatcgtccaggtcggcaccatcggcctcatcaaggccatcgaccgg
ttcgacctctcccgccgaacggatttcgcggcgttcgccattccccatgtcctcggggag
atcaagcggttcttccgcgacaccagctgggccgtccatgtcccgcgccgtctgcaggaa
ctccgcatcgacctggcccaggcaatggagcatctgtccgccctcctggaccgggaaccc
accgtcaaagagctggccgagcacctgcagctcacggaggaggagatcatcgagggcatc
gtggccggcaacggctacacggccgtctccctgcacctctcctgcgacagcgaggcgacg
cagggcgccggcgcacccgccttcgccgaccttctcggcgcgaccgaccccgccacggag
cacgtcgaggaccggtacgccctggcctcactcctggaacagctcggtgagcgtgaccgg
ctgatcgtgcatctgcgcttcgaccgggagatgacccaggcccagatcgggacggtgctc
ggtatctcccagatgcatgtctcccgactgctcgcccgcatcatcaagcagctgcgcaag
ggcatgctcggccagcagtga
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