Streptomyces explomaris: SLV14_002061
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Entry
SLV14_002061 CDS
T11122
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sexp Streptomyces explomaris
Pathway
sexp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLV14_002061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sexp03019
]
SLV14_002061
03400 DNA repair and recombination proteins [BR:
sexp03400
]
SLV14_002061
Enzymes [BR:
sexp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLV14_002061
Messenger RNA biogenesis [BR:
sexp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SLV14_002061
DNA repair and recombination proteins [BR:
sexp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SLV14_002061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Pribosyltran
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
UYB39547
LinkDB
All DBs
Position
2431350..2433515
Genome browser
AA seq
721 aa
AA seq
DB search
MSNEDLRAAADAVLTRLVGDPGGEVSLREDQWRAIEALVADHRRALVVQRTGWGKSAVYF
VATALLRERGSGPTVIVSPLLALMRNQVEAAARAGIRARTINSANTEEWDTVQAEVAAGD
VDVLLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTMLTDL
PPGVPVLATTATANARVTADVAEQLGTGEGSTEALVLRGPLDRESLSLGVLPLPDAAHRL
AWLADHLHELPGSGIIYTLTVAAAEEVTAFLRHRGHTVSSYTGKTENADRQQAEDDLLAN
RVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVKHAEVLLLPGREDE
AIWKYFASLAFPPEEQVRRTLDVLAAAGRPVSLPALEPQVELRRSRLEIMLKVLDVDGAV
QRVKGGWTSTGRPWAYDAERYAWVSRQREAEQQAMREYATTTGCRMEFLRRQLDDEAAVA
CGRCDNCGGARFTTEVSAASLDAARGELGRPGVEVEPRRMWPTGLPAVGVDLKGRIPAGE
LAATGRALGRLSDIGWGNRLRPMLAPQAPDGPVPDDVANAVVTVLADWAKGPGGWASGAA
EAPARPVGVVALSSSSRPQLIRSLAERIAAVGRMPFLGTVSSSDDGADGRIPRSNSAQRL
RALHGSLGVPPELAQALAAADGPVLLVDDFADTGWTLAMAARLLRRAGAEGVFPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaagatctgcgtgccgcagccgatgccgtcctgacccgcctcgtcggggat
ccgggcggcgaggtcagcctgcgggaggatcagtggcgcgcgatcgaggccctggtcgcc
gaccaccgccgtgccctggtcgtgcagcgcacgggctggggcaagtccgcggtctatttc
gtcgcgacggcgctgctgcgcgagcgcggcagcgggccgaccgtgatcgtctccccactg
ctcgccctgatgcgtaatcaggtcgaggcggccgcgcgggcggggatccgcgcgcgcacg
atcaactccgccaacaccgaggagtgggacaccgtccaggccgaggtggcggccggtgac
gtggatgtcctgctggtgagccccgagcggctcaacaaccccgatttccgcgatcaggtg
ctccccaagctcgccgcggcgacgggtctgctggtggtcgacgaggcccattgcatctcc
gactggggccatgatttccggccggactaccgacggctgcgcacgatgctcaccgatctc
ccgcccggtgtgccggtgctcgccaccaccgcgacggccaacgcgcgggtgacggccgat
gtcgccgaacaactcgggacgggcgagggctccaccgaggcgctggtcctgcgcgggcca
ctggaccgggagagcctgagcctgggtgtgcttccgctgccggatgccgcgcaccgactc
gcctggctcgcggaccatctgcacgagctgccgggctcggggatcatctacacgctcacc
gtcgccgccgccgaggaggtcacggcgttcctccgacatcgggggcacacggtctcctcg
tacaccggcaagacggagaacgcggaccgccagcaggccgaggacgatctgctcgccaac
cgggtcaaggcactggtggcgacctcggcgctgggcatgggcttcgacaagcccgacctg
gggttcgtggtgcatctgggctcgccgtcgtcgcccatcgcgtactaccagcaggtgggc
cgggccggccgtggcgtcaagcacgccgaggtgctgctgctgcccgggcgggaggacgag
gcgatctggaagtacttcgcttcgctggcgttcccgcccgaggagcaggtgcggcggacc
ctggacgtgctggcggccgccggccggccggtgtcgctgccggccctggagccccaggtc
gaactgcgccgctcgcgcctggagatcatgctcaaggtcctcgatgtggacggcgccgtg
cagcgcgtcaaggggggatggacgtccaccggccggccgtgggcgtacgacgccgagcgc
tatgcgtgggtgtcacgccagcgcgaggccgaacagcaggcgatgcgcgagtacgccacc
acgacgggctgccggatggagttcctgcggcggcagttggacgacgaagcggctgtggca
tgcggccgctgcgacaactgtggtggtgcacggttcaccaccgaggtgtccgccgcctcg
ctggacgccgcgcgcggtgagctgggccggccgggggtggaggtcgagccgcggcggatg
tggccgacgggcctgccggccgtcggtgtcgatctcaaggggcggatcccggcgggcgag
ctggccgcgaccggccgcgccctggggcggctctccgacatcgggtggggcaaccggctg
cgtccgatgctcgccccgcaggctccggacggcccggtcccggacgatgtggcgaacgcg
gtggtcacggttctcgccgactgggccaagggccccggtggttgggcctctggggcggcg
gaggcaccggcccgcccggtgggcgtcgtcgcgctctcgtcgagcagccgtccgcagctg
atccggtcgctggccgagcggatcgccgcggtcggccggatgccgttcctgggcacggtg
tcctcgtcggacgacggtgccgacggcaggattccgcgtagcaacagcgcccagcggctg
cgggccctgcacggttcactgggcgtgccgccggagctggcgcaggccctggctgcggca
gatggcccggtgctgttggtggacgacttcgccgacaccggctggaccctggcgatggcc
gcccggctgctgcgccgggcgggagcagagggggtgtttccgctggtcctcgccgtacag
ggctga
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