Streptomyces explomaris: SLV14_002120
Help
Entry
SLV14_002120 CDS
T11122
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sexp Streptomyces explomaris
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sexp03009
]
SLV14_002120 (rimO)
Enzymes [BR:
sexp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SLV14_002120 (rimO)
Ribosome biogenesis [BR:
sexp03009
]
Prokaryotic type
ribosomal protein modification factors
SLV14_002120 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
TRAM_2
Radical_SAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
UYB39601
LinkDB
All DBs
Position
complement(2498945..2500429)
Genome browser
AA seq
494 aa
AA seq
DB search
MPERRTVALVTLGCARNEVDSEELAGRLAADGWDLVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYGDISGRLQTIL
SGGIHASHTPRDRRKLLPISPAERQDAAEVALPGHAQDTPPEDLPEGVAPASGPRAPLRR
RLGSSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAGEGVKEIMLVSE
NNTSYGKDLGDIRLLETLLPELAAVDGIERIRVSYLQPAEMRPGLIDVLTGTDKVAPYFD
LSFQHSAPGVLRTMRRFGGTDSFLELLETIRTKAPQAGARSNFIVGFPGESESDLAELER
FITEARLDAIGVFGYSDEDGTEAASYEDKVDPDVVAERLARVSRLAEELTAQRAEERIGE
TLRVLVDRTDDEDGVVGRAAHQAPETDGVTLLSTGQELEPGRMVEAKVVASEGVDLVAEV
LSVEGTGCTEEAGR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcctggcagcggacggctgggacctcgtcgaggaagccgcc
gatgccgatgtcgccgtcgtcaacacctgtggtttcgtcgaggccgccaagaaggactcc
gtcgatgccctgctggaagccaacgatctgaaggatcacggcagaacccaggccgtagtg
gccgtcggctgcatggccgagcgctacggcaaggagctcgccgaggcgctgcccgaggcg
gacggggtgctcggcttcgacgactacggcgatatctccggccgtctgcagaccatcctg
agcggcggcatccacgcctcgcacaccccgcgcgaccgccgcaagctgctgccgatcagc
ccggccgagcgccaggacgccgccgaggtcgcgctgcccggccatgcccaggacaccccg
cccgaggatctgccggagggcgtcgcaccggcctccggaccgcgggccccgctgcgccgc
cgtctcggcagcagcccggtggcctcggtgaagctggcctccggctgcgaccggcgctgc
tcgttctgcgccatcccgtccttccgcggctccttcatctcccgccggccctccgatgtg
ctcggggagacgcgctggctggccggggagggtgtgaaggagatcatgctggtctccgag
aacaacacctcctacggcaaggacctcggcgacatccggctgctggagacgctgctgccg
gagctggcggccgtcgacggcatcgagcggatccgggtcagctacctgcagcccgcggag
atgcggcccggcctcatcgacgtgctgaccggcaccgacaaggtggcgccctacttcgat
ctgtccttccagcactcggcgcccggtgtgctgcgcaccatgcggcgcttcggcggcacg
gacagcttcctggagctgctggagacgatccgtaccaaggcgccgcaggccggtgcccgc
tcgaacttcatcgtcggcttccccggggagagcgagagcgacctggcggaactggagcgc
ttcatcaccgaggcccggctcgatgccatcggcgtcttcggttactccgacgaggacggc
accgaggccgcctcgtacgaggacaaggtcgacccggacgtggtcgccgagcggctggcg
cgggtgtcgcggctggccgaggagctgaccgcgcagcgcgccgaggagcggatcggcgag
acgctgcgggtgctggtcgaccggaccgacgacgaggacggtgtcgtcgggcgggccgcg
caccaggctccggagaccgacggcgtcaccctgctgtcgaccggccaggagctggagccc
ggtcgtatggtcgaagcaaaggtggtggcgagcgagggcgtggacctcgtcgcggaggtg
ctgtcggtggagggcacggggtgtaccgaggaggcgggcagatga
DBGET
integrated database retrieval system
