Streptomyces explomaris: SLV14_002140
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Entry
SLV14_002140 CDS
T11122
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sexp Streptomyces explomaris
Pathway
sexp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLV14_002140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sexp03019
]
SLV14_002140
03016 Transfer RNA biogenesis [BR:
sexp03016
]
SLV14_002140
Enzymes [BR:
sexp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SLV14_002140
Messenger RNA biogenesis [BR:
sexp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SLV14_002140
Transfer RNA biogenesis [BR:
sexp03016
]
Prokaryotic type
tRNA degradation factors
SLV14_002140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
CdsD_C
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UYB39617
LinkDB
All DBs
Position
complement(2529231..2531450)
Genome browser
AA seq
739 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATSASKTPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETVMALNPDHLYDVVAINAASCSTQLAGLPFSGPVGGTRVALINGQWVAFPTHSELENA
VFDMVVAGRVLPDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLAAKAAKPVGEFPIFLDYQDDVLEALTAAVKDELSQALTIAGKQERETELDRVKG
VAAEKLLPQFEGREKEISAAYRSLTKSLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGAP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGQTHYVALTDILGAEDAFGDMDFKVAGTKTFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVVAVGAKVQVEIAEIDQRGKLSL
IPVIEEEDAAEDTKDDAAK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaagccgtgatcgacaacggttccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggttccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccacctccgcttccaagacgccgaaggaccag
ctggacttcttcccgctgaccgtcgacgtcgaggagcggatgtacgcagccgggaagatc
cccggttccttcttccgccgtgagggccgcccctccgaggacgcgatcctcacctgccgc
ctgatcgaccggccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacggtcatggcgctcaaccccgaccacctctacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggtctgcccttctccggcccggtcggcggcacccgt
gtcgccctgatcaacggccagtgggtggcgttcccgacccacagcgagctcgagaacgcc
gtcttcgacatggtcgtggccggccgcgtcctcccggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctggtcaaggacggcgccgaggccccg
accgaagaggtcgtcgccgcgggtctcgaggccgccaagcccttcatcaaggtcctgtgc
aaggcgcagtcggacctcgccgccaaggccgccaagcccgtcggtgagttcccgatcttc
ctcgactaccaggacgacgtcctggaggcgctcaccgccgcggtcaaggacgagctctcc
caggcgctgaccatcgccggcaagcaggagcgcgagaccgagctggaccgcgtcaagggc
gtggccgccgagaagctgctcccgcagttcgagggccgcgagaaggagatctccgccgcg
taccgttcgctgaccaagagcctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggcgtcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgg
gtgcacggttccgccctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtgggtgcgccc
aagcgccgggagatcggccacggtgcgctcgccgagcgcgccatcgtgccggtgctgccg
acccgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgggctccaacggc
tcgacgtccatgggctcggtctgcgcctcgaccatgtcgctgctgaacgccggtgtgccc
ctcaaggccccggtcgccggtatcgccatgggcctgatctcccaggagatcgacggccag
acccactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcacgaagaccttcgtgaccgccctccagctggacaccaagctggac
ggcatcccggcctccgtcctggccgccgcgctcaagcaggcccgcgacgcccgtctgcac
atcctcgatgtgatgaacgaggccatcgacgttccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
acgatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggtgcgttcgtctccctgctcccgggcaaggacggcctgctccacatc
tcgcagatccgcaagctcgccggtggcaagcgggtggagaacgtcgaggacgtggtcgcg
gtcggcgccaaggtccaggtcgagatcgccgagatcgaccagcgcggcaagctctccctg
atccccgtgatcgaggaagaggatgcggccgaggacacgaaggacgacgccgccaagtga
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