Streptomyces explomaris: SLV14_002165
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Entry
SLV14_002165 CDS
T11122
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sexp Streptomyces explomaris
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sexp03016
]
SLV14_002165 (truB)
Enzymes [BR:
sexp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SLV14_002165 (truB)
Transfer RNA biogenesis [BR:
sexp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SLV14_002165 (truB)
Prokaryotic type
SLV14_002165 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UYB39642
LinkDB
All DBs
Position
complement(2566448..2567377)
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AA seq
309 aa
AA seq
DB search
MKRESNKPGGLVIVDKPSGFTSHDVVAKMRGMARTRRVGHAGTLDPMATGVLVLGIERAT
KLLGHLALTEKEYVGTIRLGQTTVTDDAEGEITASKPAHGLAREDIDAGVAELSGAIMQV
PSKVSAIKINGKRSYSRVREGEDVEIPARPVTVSSFVVHSAHEAEAEDGTPVTDLLVSVE
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDRARTLEQLQAAVDDTEGEGLPV
MPLGDAAAAAFTRWDVAEPQARLLLNGARIPMPRFEGSGPVAAFGPDGRFLALVENQGGK
AKSLAVFAV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgagagcaacaagccgggcgggctcgtcatcgtcgacaagccgtccggcttc
acttcgcacgacgtggtggcgaagatgcgcggtatggcgcgcacccgccgggtcgggcac
gccggcaccctcgacccgatggcgacgggcgtactcgtcctgggcatcgagcgggccacc
aagctgctgggccatctcgcgctgacggagaaggagtacgtcggcacgatccggctcggc
cagacgaccgtcaccgatgacgccgagggcgagatcaccgcgtcgaagccggcgcacggc
ctcgctcgtgaggacatcgacgcgggcgtcgccgagctgtccggcgcgatcatgcaggtc
ccgtcgaaggtcagcgccatcaagatcaacggcaagcgttcgtactcgcgggtccgtgag
ggcgaggacgtggagatcccggcccgcccggtgaccgtctcctcgttcgtggtgcactcc
gcccacgaggccgaggccgaggacggcaccccggtgaccgatctgctggtctccgtcgag
tgctcgtccggtacgtacatccgcgcgctggcccgcgatcttggggccgggctcggcgtc
ggcggccatctgaccgcgctgcgccgcacccgcgtcggcccgtacaagctggaccgggcg
cgcacgctcgaacagctccaggccgcggtggacgacaccgagggcgagggcctgccggtc
atgccgctcggcgacgcggcagccgcggcgttcacccgctgggatgtcgccgagccgcag
gcgcggctgctgctcaacggggcgcggatcccgatgccgcgcttcgagggctccggcccg
gtcgcggcgttcgggccggacggccggttcctggcgctggtggagaaccagggcgggaag
gccaagagcctggcggtgttcgcggtctag
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