Streptomyces explomaris: SLV14_002253
Help
Entry
SLV14_002253 CDS
T11122
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sexp Streptomyces explomaris
Pathway
sexp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SLV14_002253 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sexp03019
]
SLV14_002253 (rnc)
03009 Ribosome biogenesis [BR:
sexp03009
]
SLV14_002253 (rnc)
03036 Chromosome and associated proteins [BR:
sexp03036
]
SLV14_002253 (rnc)
Enzymes [BR:
sexp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SLV14_002253 (rnc)
Messenger RNA biogenesis [BR:
sexp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SLV14_002253 (rnc)
Ribosome biogenesis [BR:
sexp03009
]
Eukaryotic type
90S particles
RNase
SLV14_002253 (rnc)
Prokaryotic type
rRNA processing factors
SLV14_002253 (rnc)
Chromosome and associated proteins [BR:
sexp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SLV14_002253 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UYB39721
LinkDB
All DBs
Position
complement(2668642..2669481)
Genome browser
AA seq
279 aa
AA seq
DB search
MSDANSTSRKRGDEPTPADTASSHTLLEGRLGYQLESALLVRALTHRSYAYENGGLPTNE
RLEFLGDSVLGLVVTDTLYRIHPDLPEGQLAKLRAAVVNSRALAEVGRGLDLGAFIRLGR
GEEGTGGRDKASILADTLEAVIGAVYLDQGLDAAGELVHRLFDPLIEKSSSLGAGLDWKT
SLQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAW
RAIRAAADEAAKAAASGDEVSPAAENSAPAAGDGSSSAH
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgccaactcgacttcccgcaaacgcggggatgaaccgactccggcggacaca
gcctcgtcccacacgcttctggaagggcggctcgggtaccagctcgagtccgcccttctg
gtgcgtgcgctgacgcaccgctcgtacgcatacgagaacggcggtctgcccaccaacgag
cggctcgaattcctcggggattcggtgctcggcctggtggtcacggacacgctgtaccgc
atccaccccgatctcccggaaggccagctggccaagctccgggccgcggtggtcaactcg
cgtgcgcttgccgaggtgggccgcggcctcgacctcggcgccttcatccgcctcggacgg
ggcgaagagggcacgggcggccgggacaaggcctccatcctcgccgacacccttgaagcg
gtgatcggcgcggtctatctcgaccagggtctcgacgcggccggcgagctggtgcaccgg
ctcttcgacccgctgatcgagaagtcctccagcctgggcgcgggcctggactggaagacc
agcctccaggaactcaccgcgaccgaaggcctcggcgttccggagtacctggtcaccgag
accggccccgaccacgagaagacctttactgctgccgcccgcgtcggtggtgtctcgtac
ggcaccggcaccggccgcagcaagaaggaagccgagcagcaggcggccgagtccgcgtgg
cgtgcgattcgcgccgcggcggacgaggcggccaaggcggcagcttccggcgacgaggtg
tcgccggcagcggagaactcggctccggccgccggcgacggttcgtcgtcggcacactga
DBGET
integrated database retrieval system
