Streptomyces explomaris: SLV14_002642
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Entry
SLV14_002642 CDS
T11122
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sexp Streptomyces explomaris
Pathway
sexp03420
Nucleotide excision repair
sexp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SLV14_002642
03430 Mismatch repair
SLV14_002642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sexp03400
]
SLV14_002642
Enzymes [BR:
sexp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLV14_002642
DNA repair and recombination proteins [BR:
sexp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLV14_002642
MMR (mismatch excision repair)
Other MMR factors
SLV14_002642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
Helicase_Sgs1
Zn_ribbon_TiaS
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
UYB44766
LinkDB
All DBs
Position
complement(3104496..3106688)
Genome browser
AA seq
730 aa
AA seq
DB search
MPDSADGVLDGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYGVRAGILQPASVL
AVTFTARAAGEMRGRLRQLGAGGVQARTFHSAALRQLQFFWPKAVGGEVPRLLERKIQLV
AEAAARCRIRLDRNELRDVTAEIEWSKVTQTVPADYPAAVAKAGREAPRDPAEIGQIYGT
YEQLKRDRGSIDFEDVLLLTVGVLQDRHDIAEQVRAQYQHFVVDEYQDVSPLQQRLLELW
LGDRDNLCVVGDASQTIYSFTGATPDHLLNFRTRHPNATVVKLVRDYRSSPQVVHLANGL
LSQAQGRAAEHRLELISQREAGPEPVYTEYADEPAEAEGTARRIRDLIASGVSAGEIAVL
FRINAQSEVYEQALADVGVPYQLRGAERFFERPEVREAGVKLRGAARFGSNDALLDDAVD
LPSEVRAVLSDMGWASRPPAGSGAVRDRWESLAALVRLAEDFAEARPTATLADLVAEMDE
RANAQHAPTVEGVTLASLHAAKGLEWEAVFLVGLTEGMMPITYARTDEQIEEERRLLYVG
VTRARLHLGLSWSLARSPGGRASRRASRFLSGLRPGSGAVAGRRTPGAVSGGVERGEGAA
AVARRPKHRSPARCRVCNRTLTDAGEMKLMRCEDCPSELDEALYERLCEWRAEQAARSRQ
PAYCVFTDKTLMAIAEAVPGTESELAVISGVGRRKFDRYGSDVLAICAGEELAGVAEEGP
GGAAKNSSKK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgactcggcggacggggtgctcgacgggctcgaccccgagcagcgcgaggtcgcg
acggctctgcacggtccggtgtgcgtgctggcgggtgccggcacgggcaagacccgcgcg
atcacccaccggatcgcttacggggtacgggccggaattctgcagcccgcgagtgtgctc
gctgtcacgttcacggcccgcgcggccggcgagatgcgcggccgactgcgccagctcggc
gcgggcggggtccaggccaggacgttccactccgcggccctgcggcagctccagttcttc
tggccgaaggccgtcggcggcgaggttccgcggctgctggagcgcaagatccagctcgtc
gccgaggccgccgcccgctgccgcatccggctcgaccgcaatgagctgcgcgatgtcacg
gccgagatcgagtggtccaaggtcacccagaccgtcccggcggactatccggcggcggtc
gccaaggcgggccgtgaggccccgcgcgacccggccgagatcgggcagatctacgggacg
tacgaacagctcaagcgcgaccggggcagcatcgacttcgaggatgtgctgctgctcacg
gtcggtgtgctgcaggaccggcacgacatcgccgagcaggtccgtgcgcagtatcagcac
ttcgtcgtcgatgagtaccaggacgtcagcccgctccagcagcggctgctggagctgtgg
ctgggggaccgcgacaacctctgcgtggtcggcgacgccagccagacgatctacagtttc
accggcgccacccccgaccacctcctcaacttccgcacccgccatccgaacgcgacggtc
gtcaagctcgtccgcgactaccgctccagcccccaggtcgtgcatctcgccaacggcctg
ctctcccaggcccaggggcgtgccgccgagcaccgcctggagctgatctcgcagcgcgag
gcgggccccgagcccgtgtacacggagtacgccgacgagcccgccgaggccgagggcacc
gcccgccggatccgtgacctgatcgcttccggtgtgtcggccggtgagatcgccgtcctc
ttccgcatcaacgcccagtccgaggtctatgagcaggcgctggccgatgtcggcgtgccg
tatcagctgcggggcgccgagcggttcttcgagcggccggaggtgcgcgaggccggcgtc
aagctgcggggcgccgcccgcttcgggtccaacgacgcgctgctcgacgacgcggtggac
ctgccgtccgaggtgcgggcggtgctcagcgacatgggctgggccagccggcccccggcc
ggttccggggcggtgcgggaccgctgggaatccctggcggccctggtgcggctcgcagag
gacttcgccgaggcccggcccacagccaccctcgccgacctcgtcgccgaaatggacgag
cgggccaacgcgcagcacgccccaacggtcgaaggcgtgaccctcgcgtccctgcacgcc
gccaagggcctggagtgggaggccgtcttcctggtcggtctcaccgaaggcatgatgccg
atcacctacgccaggaccgacgagcagatagaggaggaacgccggctgctgtatgtcggc
gtcactcgcgcccggctgcatctggggctgtcctggtcgctggcgcgctctccgggcggg
cgggcctcccgccgcgccagccgcttcctgagcggcctgcggccgggctccggggcggtg
gcgggccgccgcacaccgggcgcggtctcagggggcgtcgagcgcggtgagggggcggcg
gcggtggcacggcgccccaagcaccgcagcccggcccgctgccgggtctgcaacaggacg
ctcacggacgcgggcgagatgaagctgatgcggtgtgaggactgcccttcggagctggac
gaggcgctgtacgagcggctgtgcgagtggcgggccgagcaggccgcgcgctcccggcag
cccgcgtactgcgtcttcaccgacaagacactgatggcgatcgcggaggccgttccggga
accgaatcggagcttgccgtcatctcaggagtggggcggcggaagttcgaccgctacggc
agcgatgtgctggcaatctgtgccggcgaggagctcgcgggggtcgcggaggaggggccc
ggaggcgccgcgaaaaactcgtcgaaaaaatag
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