Streptomyces explomaris: SLV14_002646
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Entry
SLV14_002646 CDS
T11122
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sexp Streptomyces explomaris
Pathway
sexp03420
Nucleotide excision repair
sexp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SLV14_002646
03430 Mismatch repair
SLV14_002646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sexp03400
]
SLV14_002646
Enzymes [BR:
sexp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLV14_002646
DNA repair and recombination proteins [BR:
sexp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLV14_002646
MMR (mismatch excision repair)
Other MMR factors
SLV14_002646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UYB40065
LinkDB
All DBs
Position
complement(3110511..3114443)
Genome browser
AA seq
1310 aa
AA seq
DB search
MSARLTDPDQLKELLGIPFTPEQTECITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRAALLAAGVTDPDALPSATGDQPPGEPRISTYHAFAG
QLLKDHGLRIGLEPSARLLADATRFQLAARTLRAAPGPYPALTTSLPSLVEDLLALDAEL
AEHLVDPAALHAYDSELLAALEGVKLTNADLRRAPETARGRLELLDLVTAYRSEKRRRDL
LDFGDQIAHSATLATTRPEVGRILRDEFRVVLLDEYQDTSVAQRLLLSGLFGAGAGTGDT
TGTGDATGAGGATGHAVTAVGDPCQAIYGWRGASVANLDDFPAHFPFQDGTPARRYALSE
NRRSGGRLLDLANGLAAPLRRMHEGVEALRPAPGAERDGLVRCALLPTHAEELTWLADSL
AHLVHTGTPPGEIAVLCRTAGDFARIQGELVARDIPVEVVGLSGLLHLPEIADLVAVCEV
LQDPTANAALVRLLIGPRWRIGPRDLALLGRRARTLVHHGGPSDDPGQRLAEAVEGVDPA
ETISLADALDTFLEAEGPDDGLPFSSEARVRFAYLATELRDLRRSLGDPLMDVLHRVLTA
TGLEVELSASPHALAARRRETLGTFLDIAAGFAAKQGGESLDGDATLLAFLGFLRTAVQH
EKGLDSSLPGGDNTVKVLTAHKSKGLEWDVVAVPGLVGKQFPSEQARESWTSRAKVLPHA
LRGDAATLPDVGEWTARGLKSFKEAMKHHQETEELRLGYVTFTRPRSLLLGSGHWWGPQQ
KRPRGPSAFLEALREHCEAGHGEIEHWAAAPEDGEENPALSEAATEQAWPLPLDPTATAR
RRAAAATVRAHLERRTGQQAAVSASAAPSLSAHDPDWPPPPPDDTWDPDPYDPYDVPEAD
AFGLREADPFEDASAYDGPDAGPFAAASFEADPFEADAFEADAFEADAFEADAFEAGPSD
AGRSYAGPFEARPSEDAAVHDVPVHDTAEAEAEAQAQAQAQGRAGNGTTPASAADRAAPR
PRIIAQRSTEPDLTGPADSGHPAATSHPDPVTAHHGDAAHPEDAGPHTLLPEERRTVGSW
DRDLDALAAELRRARATVRDVPLPSALSATQLLRLAADPNGFARELARPMPRPPQPGARR
GTRFHAWVESRFEELTLPLLGPDELPGAEPGEETEIVDEHDLEALKEAFARTPYAHRTPY
RVEAPFQLTLAGRVIRGRIDAVYKEPGPEGDRFEIVDWKTGRAHTADPLQLAVYRLAWAE
RYGLEPSAVDAAFLYVRSGEVVRPARLPGRAGLERILLGETADRPPPEGR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagctcgcctcaccgaccccgaccagctcaaggagctgctcggcatcccgttcacc
ccggagcagacggagtgcatcaccgccccgcccgccccgcaggtcatcgtggccggagcc
ggatccggcaagaccacggtcatggccgcccgcgtggtgtggctggtcggcaccggccag
gtcgcccccgaacaggtcctcgggctgaccttcacgaacaaggccgccggcgaactcgcc
gagcgcgtcagggccgcgctgctcgccgccggcgtcaccgatcccgacgccctcccgtcc
gccaccggcgaccagccccccggagagccgcggatctccacctaccatgccttcgccggc
cagctcctcaaggaccacggcctgcgcatcggcctggaacccagcgcccggctcctcgcc
gacgccacccgcttccagctcgccgcccgtaccctgcgcgccgcccccggcccttacccg
gcgctcaccacctccctgccctccctcgtggaggacctcctcgccctggacgccgagctc
gccgaacacctcgtggaccccgccgcgctccacgcctacgacagcgagctcctcgccgcc
ctcgagggggtgaaactcaccaacgccgacctgcgcagggcccccgaaaccgcccgcggc
cgcctggaactgctcgacctcgtcaccgcctaccgcagcgaaaagcgccgccgtgacctc
ctcgacttcggcgaccagatcgcccactccgcgaccctcgccaccacccgcccggaagtc
ggccgcatcctgcgcgacgaattccgtgtcgtgctcctcgacgagtaccaggacacctcc
gtcgcccaacgcctgctgctctccggcctcttcggcgccggggccgggaccggggacacc
accgggaccggggacgccaccggggccgggggcgccaccggtcacgccgtcaccgccgtc
ggcgacccctgccaggccatctacggctggcgcggcgcctccgtggccaacctcgacgac
ttccccgcccacttccccttccaggacggcacccccgcccgccggtacgccctcagcgag
aaccgccgcagcggcggccgcctcctcgacctcgccaacggcctcgccgcccccctccgc
cggatgcacgaaggcgtcgaagccctgcgccccgcccccggcgccgagcgcgacggcctc
gtccgctgcgccctgctgcccacccacgccgaagagctcacctggctcgccgactccctc
gcccacctcgtccacaccggcaccccacccggagaaatcgccgtgctctgccgcaccgcc
ggtgatttcgcccgcatccagggcgaactggtcgcccgggacatccccgtagaggtcgtc
ggcctgtccgggctgctgcatctgcccgagatcgccgatctcgtcgccgtctgcgaggtg
ctccaggaccccacggccaacgccgccctggtccgcctgctgatcggcccgcgctggcgg
atcggcccccgcgacctggcgctcctcggccgccgcgcccgcaccctcgtccaccacggc
ggcccgtccgacgaccccggacaacgccttgccgaggccgtcgaaggtgtcgaccccgcc
gagaccatctcgctcgccgacgcactcgacaccttcctggaagccgaaggacccgacgac
ggcctcccgttctccagcgaggcacgggtgcgcttcgcctacctcgccaccgaactccgc
gacctgcgccgctccctcggcgacccgctcatggacgtactccaccgggtgctcaccgcg
acgggcctggaagtcgagctgtccgcatccccgcacgccctcgccgcccgccgccgcgaa
accctcgggaccttcctcgacatcgcggccggattcgccgccaaacagggcggcgaatcc
ctcgacggcgacgccaccctcctcgccttcctcggctttctgcgcaccgccgtccagcac
gagaagggcctcgacagctccctccccggcggcgacaacaccgtcaaagtgctcaccgcc
cataaatccaagggcctggaatgggacgtcgtcgccgtacccggcctggtcggcaagcaa
ttccccagcgaacaggcccgcgagtcctggaccagccgcgccaaggtcctcccgcacgcc
ctgcgcggcgacgcggcgaccctccccgacgtcggggaatggaccgcccgcggcctgaag
tccttcaaggaggcgatgaagcaccaccaggagaccgaggaactccgcctcggctatgtc
accttcacccgcccccgctccctgctgctcggctccggccactggtggggcccccagcag
aagcggccacgcggcccgtccgccttcctggaggccctgcgcgagcactgcgaagccgga
cacggcgagatcgagcactgggctgcggcccccgaggacggcgaggagaacccggccctc
tccgaggccgccacggaacaggcctggccgctgcccctcgaccccaccgccaccgcccgc
cgccgcgccgccgcggccacggtccgcgcccatctggaacgccggacggggcagcaggcg
gccgtctccgcgtccgccgcgccctccctctcggcccacgaccccgactggccgccgccc
ccgccggacgacacatgggacccggacccgtacgacccgtacgacgtccccgaggccgac
gcattcggtctccgggaagccgacccgttcgaggacgcctcggcgtacgacgggcccgat
gccggccccttcgcggcggcttctttcgaggcggaccctttcgaagccgacgccttcgaa
gccgacgccttcgaagccgacgccttcgaagccgacgccttcgaagccggcccgtccgac
gccggccggtcgtacgccggcccgttcgaagcccgaccgtccgaggacgccgcagtgcac
gacgtcccggtgcacgacaccgccgaggccgaggccgaggcccaggcccaggcgcaggcg
cagggtcgggccgggaacgggaccacgcccgcctccgcggcggaccgggccgcaccccgc
ccccgcatcatcgcccagcgctccaccgagcccgacctcaccggcccggccgactcgggc
cacccggccgccaccagccaccccgaccccgtcaccgcccaccacggcgacgccgcccac
cccgaggacgccggcccccacaccctcctccccgaggagcgccgcaccgtcggatcctgg
gaccgcgatctggacgcgctcgccgcagagctgcgccgcgcccgcgcgaccgtccgcgac
gtcccgctgccgtccgcgctcagcgccacccagctcctccgcctcgccgccgacccgaac
ggcttcgcccgcgaactggcccgccccatgccgcgcccgccacagcccggcgcccgccgc
ggcacccgcttccacgcctgggtcgaatcccgcttcgaagagctcacgctgccgctgctc
ggccccgacgaactgcccggcgccgaaccgggcgaggaaaccgagatcgtcgacgagcac
gacctcgaagccctcaaggaagccttcgcccgcaccccctacgcccaccgcacgccctac
cgggtcgaggcccccttccagctgaccctcgcgggccgggtcatccgcggccggatcgac
gccgtctacaaggagcccggccccgagggcgaccgattcgagatcgtcgactggaaaacc
ggccgcgcccacaccgccgaccccctccagctggccgtctaccgcctcgcctgggccgag
cggtacggcctggagccctccgccgtcgacgccgccttcctctacgtccgcagtggagag
gtggtcagacccgcccggctccccggccgggccgggctcgaacgcatcctgctcggagag
accgccgaccggcctcccccggaaggccgatag
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