Streptomyces explomaris: SLV14_004040
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Entry
SLV14_004040 CDS
T11122
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sexp Streptomyces explomaris
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sexp03032
]
SLV14_004040 (gyrA)
03400 DNA repair and recombination proteins [BR:
sexp03400
]
SLV14_004040 (gyrA)
Enzymes [BR:
sexp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SLV14_004040 (gyrA)
DNA replication proteins [BR:
sexp03032
]
Prokaryotic type
DNA Topoisomerases
SLV14_004040 (gyrA)
DNA repair and recombination proteins [BR:
sexp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SLV14_004040 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FaeA
Motif
Other DBs
NCBI-ProteinID:
UYB41313
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Position
4646793..4649414
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AA seq
873 aa
AA seq
DB search
MADENPPVTPDGVTAEGAPAAIEGVGMRVEPVGLETEMQRSYLDYAMSVIVSRALPDVRD
GLKPVHRRVLYAMYDGGYRPEKGFYKCARVVGDVMGTYHPHGDSSIYDALVRLAQPWSMR
MPLVDSNGNFGSPGNDPAAAMRYTECKMKQLSMEMLRDIDEETVDFQDNYDGRNQEPTVL
PARFPNLLINGSAGIAVGMATNIPPHNLREVAAGAQWALEHPEASHEELLDALIERIKGP
DFPTGALVVGRKGIEEAYRTGRGSITMRAVVAVEEIQNRQCLVVTELPYQVNPDNLAQKI
ADLVKDGKIGGIADVRDETSSRTGQRLVIVLKRDAVAKVVLNNLYKHTDLQTNFGANMLA
LVDGVPRTLSLDAFIRNWVTHQVEVIVRRTKFRLRKAEERAHILRGLLKALDAIDEVIAL
IRRSETVEVAREGLMGLLTIDEIQANAILEMQLRRLAALERQKITAEHDELQRKINEYNA
ILASPERQRQIISEELAAIVEKFGDDRRSKLVPFEGDMSIEDLIAEEDIVVTITRGGYVK
RTKTDDYRSQKRGGKGVRGTKLKEDDIVDHFFVSTTHHWLLFFTNKGRVYRAKAYELPDA
GRDARGQHVANLLAFQPDEQIAQILAIRDYEAMPYLVLATKAGLVKKTPLKDYDSPRSGG
VIAINLREQEDGTDDELIGAELVSEHDDLLLISKKAQSIRFTATDEALRPMGRATSGVKG
MSFREGDELLSMNVVRANTFVFTATDGGYAKRTAVDEYRVQGRGGLGIKAAKIVEDRGSL
VGALVVEETDEILAVTLGGGVIRTRVNEVRETGRDTMGVQLINLGKRDAVVGIAWNAEAG
REAEEVDGGAEPDETEAAEGTVPAETEGEQPAE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagaacccccctgtgaccccggacggcgtgaccgccgagggcgcgcccgcc
gccatcgaaggcgtggggatgcgtgtcgagcccgtcgggctcgagacggagatgcagcgc
tcctacctcgactacgcgatgtccgtcatcgtctcgcgtgcgctgccggacgtccgggac
ggcctcaagcccgtccaccgccgcgtcctgtacgccatgtacgacggcggctaccgcccc
gagaagggcttctacaagtgcgcccgcgtcgtcggtgacgtcatgggtacgtaccacccg
cacggcgactcctcgatctacgacgccctggtgcgcctggcacagccgtggtcgatgcgg
atgccgctggtcgactccaacggcaacttcggctccccgggcaacgacccggccgccgcc
atgcggtacaccgagtgcaagatgaagcagctctccatggagatgctgcgggacatcgac
gaggagaccgtcgatttccaggacaactacgacggccgtaaccaggagccgacggtcctg
ccggcgcgcttccccaacctgctgatcaacgggtcggccggtatcgcggtcggtatggcc
accaacatcccgccgcacaacctccgcgaggtcgcggccggtgcccagtgggcgctggag
cacccggaggcctcccacgaggagctgctggacgcgctcatcgagcggatcaagggcccg
gacttccccaccggcgcgctggtggtgggccgcaagggcatcgaggaggcctaccgcacc
ggccgtggctcgatcacgatgcgtgcggtggtggcggtcgaggagatccagaaccgccag
tgcctggtggtcaccgagctgccctaccaggtcaacccggacaacctcgcgcagaagatc
gccgacctggtgaaggacggcaagatcggcgggatcgcggacgtccgcgacgagacctcc
tcgcgtacgggccagcgtctggtcatcgtgctcaagcgggacgcggtcgccaaggtcgtc
ctcaacaacctctacaagcacaccgatctgcagaccaacttcggcgcgaacatgctggcg
ctggtcgacggggtgccgcgcacgctctcgctggacgccttcatccgcaactgggtgacg
caccaggtcgaggtcatcgtccgccggacgaagttccggctgcgcaaggccgaggagcgg
gcgcacatcctgcgcggtctgctcaaggcgctggacgccatcgacgaggtcatcgcgctg
atccggcgcagtgagacggtcgaggtggcccgcgagggcctgatgggcctgctgacgatc
gacgagatccaggcgaacgcgatcctggagatgcagctgcgccgactggccgccctggag
cgccagaagatcaccgccgagcacgacgagctgcagcgcaagatcaatgagtacaacgcg
atcctggcctccccggagcggcagcgccagatcatcagcgaggaactcgcggcgatcgtc
gagaagttcggcgacgaccggcgcagcaagctggtgcccttcgagggcgacatgtccatc
gaggacctgatcgccgaggaggacatcgtcgtcacgatcacccgtggcggctatgtgaag
cggacgaagaccgacgactaccgctcgcagaagcgcggcggcaagggcgtccggggcacc
aagctcaaggaagacgacatcgtcgaccacttcttcgtctccacgacccaccactggctg
ctgttcttcacgaacaagggccgggtctaccgcgccaaggcgtacgaactccccgacgcg
ggacgggacgcgcggggtcagcatgtggccaatctcctcgccttccagccggacgagcag
atcgcgcagatcctggcgatccgcgactacgaggccatgccgtatctggtgctcgccacc
aaggccggcctggtgaagaagacgccgctcaaggactatgactcgccgcgttccggcggt
gtcatcgcgatcaacctgcgcgagcaggaggacggcacggatgacgagctgatcggcgcc
gagctggtgtcggagcacgacgatctgctgctgatcagcaagaaggcccagtcgatccgg
ttcacggcgacggacgaggcgctgcgcccgatgggccgggccacgtccggtgtgaagggc
atgagcttccgcgagggcgatgagctgctctcgatgaacgtggtccgcgccaacaccttc
gtgttcaccgccacggacggcggctacgccaagcgcaccgcggtcgacgagtaccgcgtc
cagggccgcggcgggctgggcatcaaggccgccaagatcgtcgaggaccggggttcgctg
gtcggcgcgctggtcgtcgaggagacggatgagatcctcgcagtgacgctcgggggtggc
gtgatccgtacgcgggtcaacgaggtgcgtgagacgggccgtgacaccatgggcgtccaa
ctgatcaacctgggcaagcgtgatgccgtcgtcggcatcgcatggaacgccgaggccggc
cgtgaagccgaagaggtcgacgggggcgccgagcccgacgagaccgaggcggcggagggg
accgtgcccgcggagaccgagggcgagcagcccgcggagtaa
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