Streptomyces explomaris: SLV14_004676
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Entry
SLV14_004676 CDS
T11122
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sexp Streptomyces explomaris
Pathway
sexp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLV14_004676 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sexp03019
]
SLV14_004676 (recQ)
03400 DNA repair and recombination proteins [BR:
sexp03400
]
SLV14_004676 (recQ)
Enzymes [BR:
sexp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLV14_004676 (recQ)
Messenger RNA biogenesis [BR:
sexp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SLV14_004676 (recQ)
DNA repair and recombination proteins [BR:
sexp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SLV14_004676 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
UYB41870
LinkDB
All DBs
Position
complement(5311270..5313273)
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AA seq
667 aa
AA seq
DB search
MALADVEVVVDMDVEGASDASEAVQVLRRVFGYDAFRGSQQEIIEHVIGGGDAVVLMPTG
GGKSLCYQIPSLVRSGVGVVISPLIALMQDQVDALRALGVRAGFLNSTQDLEERRLVEAE
FLSGELDLLYLAPERLRVEQTLNLLDRGKISLFAIDEAHCVAQWGHDFRPDYLALSMLHE
RWPEVPRIALTATATEATHTEITSRLRMADARHFVASFDRPNIQYRIAAKSEPKKQLLEL
LRNEHAGDAGIVYCLSRASVEKTAQFLVDNGIAAVPYHAGLDPRTRAEHQGRFLREDGLV
VVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGQPSTAWLAYGLQDVVQQR
KMIDGSEGDEAHRRRLSAHLDAMLALCETVQCRRVRLLAYFGQESSACGNCDTCLVPPQT
WDGTVPAQKLLSTVVRLQRERGQKFGAGQIIDILLGKKTAKVIQFDHDGLSVFGVGDDLR
EAEWRGVVRQLLAQGLLAVEGDYGTLVLTEASGEVLGGRREVPMRREPEKAARAARTKAK
SKRAAPADLPEAALPVFEALRGWRGRTAKEQGVPAYVIFHDATLREIATLGPTTTAELGT
VNGVGENKLAKYGAQILDVLAGQETQDNAGTDADADAMPTPKVAQEHHAAPEPDDEELPE
PPDDIDW
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctctggcggacgtggaagtggtcgtggacatggatgtggaaggcgcttcggacgca
agcgaggcggtgcaggtgctgcgccgggtgttcgggtatgacgcgttccgcggcagccag
caggagatcatcgagcacgtcatagggggcggggacgcagtcgtcctgatgccgaccggt
ggcggcaagtcgctgtgttatcagattccctcgctggtcagaagcggtgtgggggtcgtg
atctcgccgctgatcgcgttgatgcaggaccaggtcgacgccctgcgggcgctcggagtg
cgggccgggttcctgaattcgacgcaggatctggaggagcggcggctcgtcgaggccgag
ttcctgtccggggagctggatctgctgtatttggcgcccgagcggctgcgggtcgagcag
acgctgaatctgctcgaccgcgggaagatctcgctcttcgcgatcgacgaggcgcactgt
gtcgcccagtggggccatgatttccggccggactatctggcgctgtcgatgctgcacgag
cgctggcccgaggtgccgcggatcgcgctgaccgccaccgcgaccgaggccacgcacacc
gagatcacctcacggctgcggatggcggacgcccggcatttcgtggcgagcttcgaccgg
ccgaacatccagtaccgcatcgcggcgaagagcgagccgaagaagcagctgctggagctg
ctgcggaacgagcatgcgggggacgcgggcatcgtctactgcctgtcgcgggcctcggtg
gagaagaccgcacagttcctggtggacaacggcatcgcggcggtgccgtatcacgcgggg
ctcgatccgcggacgcgtgccgagcaccagggccggtttctccgtgaggacgggctggtc
gtggtcgccacgatcgcgttcgggatgggtatcgacaagccggacgtccggttcgtggcc
catctggatctgccgaagtccgtggagggctactaccaggagacgggccgcgccgggcgg
gacgggcagccttcgaccgcctggctggcgtacgggctgcaggatgtggtgcagcagcgg
aagatgatcgacgggtcggagggcgacgaggcgcaccgacggcggctgtcggcccatctc
gacgcgatgctggcgctgtgcgagacggtgcagtgccggcgggtgcggttgctggcctac
ttcgggcaggagagcagcgcctgcggcaactgcgatacgtgtctcgtcccaccgcagacc
tgggacggcacggtccccgcccagaagctgctgtccacggtcgttcggctgcagcgtgag
cgcgggcagaagttcggcgcgggccagatcatcgacattctgctggggaagaagaccgcc
aaggtcatccagttcgatcacgacgggctgagcgtcttcggggtgggagacgacctccgc
gaggccgaatggcgcggtgtcgtacggcagttgctggcgcaggggctgctcgccgtcgag
ggtgattacggcacgctggtgctcacggaggcgagcggcgaggtgctgggcggccggcgc
gaggtgccgatgcggcgggagccggagaaggcggcgcgggcggcccggacgaaggcgaag
agcaagcgcgcggcgccggcggacctgccggaagcggcgctgccggtcttcgaggcgctg
cgcggctggcggggccgtacggccaaggagcagggcgtgcccgcgtatgtgatcttccac
gatgcgacgctgcgggagatcgccacgctcgggccgacgacgacggccgagctgggcacg
gtcaacggggtcggcgagaacaagctcgcgaagtacggcgcgcagatcctggatgtgctg
gccgggcaggagactcaggacaacgcgggcaccgatgccgacgccgacgccatgccgacg
cccaaggtggctcaggagcatcacgccgcaccggagcccgatgacgaggagctgccggag
ccgccggatgacatcgactggtga
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