Streptomyces explomaris: SLV14_004897
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Entry
SLV14_004897 CDS
T11122
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sexp Streptomyces explomaris
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sexp03021
]
SLV14_004897
Transcription machinery [BR:
sexp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLV14_004897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
DUF8073_C
HTH_3
Sigma70_ECF
HTH_24
DUF7343
PF0610-like_N
MarR
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
UYB44917
LinkDB
All DBs
Position
complement(5558072..5559010)
Genome browser
AA seq
312 aa
AA seq
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MSPRLDELRTDDTRQSASSTPPSDPTGQIPAQSLPVESDLAEMTEVDDLPEIPPFDEVGP
VDARALSKTLFERLESLEEGTHEFAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVG
TIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGD
ELAQKLDRAPTVHELAARLDISRDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGY
EDHGLEGIEYVESLKPLIAELPPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRT
LVRLRKGLMIEE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaactgcgcaccgacgacacccggcagtccgcatcgtcgaca
cccccgtccgacccgaccggacagatccctgcccagtcactgcctgtcgaatcagatctg
gcagagatgactgaggtagacgatctgcccgagatcccgccgttcgacgaggtgggcccg
gtggacgcgagggctctgtccaaaaccctcttcgagcgactcgaatcgcttgaggaaggc
acgcacgaattcgcgtacgtccgcaacaccctggtcgagctcaatctcgctctggtgaag
ttcgcggcctcccggttccgctcccgcagcgagcccatggaggacatcgtccaggtcggc
acgatcggcctgatcaaggcgatcgaccgcttcgaactcagccgtggcgtcgagttcccg
acgttcgccatgccgaccatcgtcggtgagatcaagcgcttcttccgtgacaccagctgg
tcggtgcgggtcccgaggcgtctgcaggaactgcgtctggacctcgccaaggccggcgat
gaactcgcgcagaagctggaccgcgcccccacggtgcacgaactcgccgcgcggctcgac
atcagccgtgacgaggtcgtcgaggggatggccgcgagcaacgcgtacaccgcgagctcg
ctggacgcccagcccgaggaggacgacagcgaaggcgcgctggcggaccgcatcggctac
gaggaccacggtctcgaaggcatcgagtacgtggagtccctcaagccgctgatcgccgaa
ctcccgccgcgcgaccgcaagatcctctcgctgcgcttcgtcgccaatatgacgcagtcc
gagatcggcgaggagctgggtatctcccagatgcatgtctcccgtctgctctcccgcact
ctcgtgcggctccgcaaggggctcatgatcgaggagtga
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