Streptomyces explomaris: SLV14_005344
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Entry
SLV14_005344 CDS
T11122
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sexp Streptomyces explomaris
Pathway
sexp03030
DNA replication
sexp03430
Mismatch repair
sexp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLV14_005344 (holA)
03430 Mismatch repair
SLV14_005344 (holA)
03440 Homologous recombination
SLV14_005344 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sexp03032
]
SLV14_005344 (holA)
03400 DNA repair and recombination proteins [BR:
sexp03400
]
SLV14_005344 (holA)
Enzymes [BR:
sexp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLV14_005344 (holA)
DNA replication proteins [BR:
sexp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLV14_005344 (holA)
DNA repair and recombination proteins [BR:
sexp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLV14_005344 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Lysyl_endopep_N
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UYB42468
LinkDB
All DBs
Position
6121034..6122017
Genome browser
AA seq
327 aa
AA seq
DB search
MARKTAHDDPLAPVTIAVGQEDLLLDRAVQQVVAAARAADADTDVRDLTPDQLQPGTLAE
LTSPSLFAERKVVVVRAAQDLSADTIKDVKAYLGSPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLGFVRGEFRATGRSATPEACQSLVDAIGSDLRELASACAQLA
ADVEGTIDEAVVARYYTGRAEASSFTVADRAVEGRAAEALEALRWSLATGVAPVMITSAL
AQGVRAIGKLASAPRGARPGDLARDLGMPPWKIDRVRQQMRGWSADGVATALRAVAAADA
GVKGGGDDPAYALEKAVVAIARAARSR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagacagctcacgatgacccgctcgcccccgtcacgatcgcggtgggccag
gaagacctgctgctggaccgcgcggtgcagcaggtggtggcggctgcccgggcggccgat
gcggacaccgatgtgcgtgacctcactcccgaccagctgcagcccggcaccctcgccgag
ctgaccagcccctcgctcttcgccgagcgcaaggtcgtcgtggtgcgggccgcccaggat
ctgtccgcggacaccatcaaggacgtcaaggcgtatctcggctcgcccgccgaggagatc
acgctggtgctgctgcatgccggcggtgccaaggggaagggcctgctggacgccgcccgt
aaggccggggcgcgggaagtggcctgccccaagatgaccaagccggccgaccggctgggc
ttcgtacggggcgagttccgtgcgacggggcgttcggcgacgcccgaggcctgccagtcg
ctggtcgatgcgatcggcagcgatctgcgtgagctggcatcggcctgtgcacagctggcc
gccgatgtcgagggcacgatcgacgaggccgtcgtcgcgcgctactacaccggccgggcc
gaggcatcgagcttcaccgtcgcggaccgggccgtcgagggccgggccgccgaagcgctg
gaggcactgcgctggtcgctcgccaccggcgtcgcacccgtcatgatcaccagcgcgctg
gcccaaggcgtccgcgccatcggcaagctggcctccgccccgcgcggcgcccgccccggc
gacctcgcccgcgacctcggcatgccgccctggaagatcgaccgggtacggcagcagatg
cgcggctggtcggcggacggggtggccacggcgctgcgcgcggtggcggcggccgatgcg
ggagtgaagggcggcggtgacgatcccgcgtacgccctggagaaggccgtcgtggcgatc
gcgcgggcggcccgctcgcggtga
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