Streptomyces explomaris: SLV14_005462
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Entry
SLV14_005462 CDS
T11122
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sexp Streptomyces explomaris
Pathway
sexp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SLV14_005462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sexp03021
]
SLV14_005462
Transcription machinery [BR:
sexp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLV14_005462
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
Motif
Other DBs
NCBI-ProteinID:
UYB42575
LinkDB
All DBs
Position
6250871..6252106
Genome browser
AA seq
411 aa
AA seq
DB search
MPESPVRGGSGRTAPESPAEPLVTYGTDGGSAATVPDLSAASAAITLEVAPVQTQTLADA
PAATEPDTEPDVEAAAEPLTVPQQAEPPAAEMIVEEIIPEPVPRPETGSPSSDLFRQYLR
EIGRIPLLTAAEEVELARRVEAGLFAEEKLTHATDLSSQLAFDLDKLVVLGRMAKRRLIE
ANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSR
ALADQARTIRVPVHVVELINRVVRVQRRMLQERGCEPTPEEVAAHLDLTGERVSEVLRLA
QEPVSLHAPVGEEEDVALGDLIEDGDAASPAESAAFLLLREHLDAVLSTLGERERKVVQL
RYGLADGRARTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYLD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgagtccccggtgcgcggcgggtccggtcgtaccgcaccggaatcccccgcggaa
ccactcgtgacgtacgggacggacggcggctcggccgccaccgtgcccgacctttctgcc
gcttcagcagcgatcaccctggaggtcgcccccgtgcagacccagaccctcgccgatgcg
ccggccgccacggaaccggacacggagccggacgtggaggcggccgcggagccgctcacc
gtgccgcagcaggccgaaccacccgccgccgagatgatcgtcgaggagatcatcccggag
ccggtgccgcgccccgagacgggcagcccgtcctccgacctcttccgccagtacctccgc
gagatcggccggatcccgctgctcaccgccgccgaggaagtcgagctcgcccgccgcgtc
gaggccggtctcttcgccgaggaaaagctcacccacgccaccgacctctcctcccaactc
gccttcgacctcgacaagttggtggtcctgggccggatggccaagcgccgcctcatcgag
gccaacctgcgtctggtggtctccgtcgccaagcgctacgtcggccgcgggctgaccatg
ctcgacctcgtccaggaggggaacctcggactgatccgcgccgtcgagaagttcgactac
gcccgcggctacaagttctccacctacgccacctggtggatccgccaggcgatgtcccgc
gccctcgccgaccaggcccgcaccatccgggtcccggtccatgtcgtcgagctgatcaac
cgcgtggtgcgggtccagcgcaggatgctccaggagcgcggctgcgaaccgacgcccgag
gaggtcgccgcccacctcgacctgaccggggaacgcgtcagcgaggtgctgcggctggcc
caggagccggtctcgctgcacgcccccgtcggcgaggaggaggacgtcgccctcggcgat
ctcatcgaggacggcgacgccgcctcacccgccgaatccgccgcgttcctgctgctccgc
gagcacctcgacgcggtgctgtcgaccctcggcgaacgcgaacgcaaggtcgtccagctc
cgctacggcctcgccgacggccgcgcccgcacgctggaggagatcggccggatcttcggc
gtcacccgcgaacggatacggcagatcgagtccaagaccctcaacaagctccgtgaccac
gccttcgccgaccagctccgcggctacctcgactga
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