Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_0232
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Entry
SL1344_0232 CDS
T01724
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sey
Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Pathway
sey03030
DNA replication
sey03430
Mismatch repair
sey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SL1344_0232 (dnaE)
03430 Mismatch repair
SL1344_0232 (dnaE)
03440 Homologous recombination
SL1344_0232 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sey03032
]
SL1344_0232 (dnaE)
03400 DNA repair and recombination proteins [BR:
sey03400
]
SL1344_0232 (dnaE)
Enzymes [BR:
sey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SL1344_0232 (dnaE)
DNA replication proteins [BR:
sey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SL1344_0232 (dnaE)
DNA repair and recombination proteins [BR:
sey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SL1344_0232 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CBW16334
UniProt:
A0A0H3ND04
LinkDB
All DBs
Position
269544..273026
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFNVHNELLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIERDW
LVELKEGLILLSGGRMGDVGRCLLRGNQALVEECVAFYEAHFPDRYFLELIRTGRQDEET
YLHAAVELAEARGLPVVATNDVRFLESDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKAKEGL
EERLAFLFPDEEERKKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIDARNQGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQTDMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
HLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgttcacctgcgggtgcacagcgactactctatgatcgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggcctcattaggtatgcctgcgctggcg
atcaccgattttaccaacctctgcggtctggtgaagttctacggagcgggtcatggcgcg
ggcattaaacccatcgtcggggcggactttaacgttcacaacgaactgctgggagatgag
ctgactcatctgacggtactggcggcgaataatacgggataccagaacttgacgttgctg
atctcgaaagcgtatcagcgcggctacggcgcggcaggcccgattatcgagcgcgactgg
ctggtagagcttaaagaaggtttgatcctgctttccggcgggcgcatgggcgacgtaggc
cgctgtctgctacgcggcaaccaggcgctggtggaggagtgcgttgctttctatgaagcg
cattttcccgatcgctacttcctggaactgatccgtaccggcagacaggatgaagagacc
tatctccatgctgcggttgagctggctgaggcacgtggtttgccggttgtcgcgacaaac
gatgtccgttttcttgaaagcgatgattttgacgcccatgagattcgtgtcgcgatccac
gacggtttcacgctcgacgatcctaaacgtccacgcaattattcaccgcagcagtatatg
cgcagtgaagaagaaatgtgcgagctgttctccgatattccggaggcgctggaaaatacg
gtggagattgccaaacgctgcaacgtaacggtgcgtctgggtgaatatttcttgccgcag
ttcccgaccggcgatatgaccaccgaagattatctggtcaaaaaagcgaaagaggggctg
gaagagcgtctggctttcctgtttccggacgaagaagagcgcaaaaagcgtcgcccggaa
tatgacgagcgtctggatattgaactacaggttatcaaccagatggggttccctggctac
ttcctcatcgtgatggagtttatccagtggtcaaaagataacggcgtgccggtagggccg
ggacgtggttccggggctggttcgctggtggcctacgcgctgaaaattaccgaccttgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgtgtctcgatgcct
gacttcgacgttgacttctgtatggagaaacgcgaccaggtgattgaacacgtcgcagat
atgtacgggcgtgatgcggtatcgcaaattatcaccttcggtacgatggcggcgaaagcc
gttatccgcgatgtgggccgcgtgctggggcatccgtacggttttgtcgatcgtatctcg
aagctggtgccgcccgatccgggcatgacgctggcaaaagcctttgaagcggaaccgcaa
ctgccggaaatttacgaggcggatgaagaggtcagagcgctgatcgatatggcgcgtaag
ctcgaaggcgtcacgcgtaacgccggtaagcacgctggcggcgtggtcatcgcgccgacc
aaaattaccgactttgcgccgctgtactgcgatgaagagggcaagcatccggttacccag
tttgataaaagcgacgtggaatatgccgggctggtgaagttcgacttcctcggtttgcgt
acgctgactatcatcaactgggcgctggagatgatcaacaagcggcgggcgaagaatggc
gagccaccgctggatatcgctgccattccgctggacgataaaaaaagcttcgacatgctg
cagcgctcggaaaccacggcggtcttccagcttgaatcgcgcggcatgaaagatctgatc
aaacgtctgcagccggactgctttgaagatatgatcgcgctggtggccctgttccgtccc
ggcccgttgcagtcagggatggtagataacttcatcgaccgtaagcacggtcgtgaagaa
ctctcttacccggacgttcagtggcagcatgaaagcctgaagccggtactggagccgacc
tacggcatcattctgtatcaggaacaggtgatgcagattgcccaggtactttccgggtat
actctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaggagatg
gccaaacagcgttccgtttttgaagaaggcgcgaaaaagaacggtatcgacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacgggtttaacaaatcgcac
tccgccgcttatgcgctggtttcttaccagacgctatggctaaaggcgcactatccggca
gagtttatggcggcggtgatgactgccgatatggacaacaccgagaaggtcgtcggcctg
gtggacgagtgctggcggatgggactgaaaattctgccgccggatattaactccgggttg
taccatttccacgttaatgatgagggcgagatcgtctacggtattggcgcgatcaaaggc
gtcggcgaaggtccgatcgaagcgatcatcgacgcgcgtaatcagggcggctatttccgc
gagctgtttgatctgtgcgcgcggaccgacaccaaaaagctcaaccgccgggtgctggaa
aagctgatcatgtccggggcgttcgaccgcctggggccgcaccgcgccgcgctgatgaac
tcattgggcgatgcgctgaaagccgccgaccagcacgccaaagcggaagctatcggtcag
acggatatgttcggcgtgctggcggaagagccggagcaaatcgaacaatcctatgccagc
tgccagccgtggccggagcaggtggtgttagatggggaacgtgaaacgttggggctgtac
ctgacgggccaccctatcaatcagtatttaaaagaaattgagcgctatgtcggcggggta
aggctcaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtg
attgccgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcgtctggaagtgatgttatttaccgacgcgctggataaataccagcag
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagctcgcgaaaaatac
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcgcggctgcgttttggcgcaacgtggcgtgtctctccgagcgat
catttacttaacgatctgcgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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