Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_0828
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Entry
SL1344_0828 CDS
T01724
Symbol
rimO
Name
(GenBank) conserved hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sey
Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Brite
KEGG Orthology (KO) [BR:
sey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sey03009
]
SL1344_0828 (rimO)
Enzymes [BR:
sey01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SL1344_0828 (rimO)
Ribosome biogenesis [BR:
sey03009
]
Prokaryotic type
ribosomal protein modification factors
SL1344_0828 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
CBW16925
UniProt:
A0A0H3N9F8
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All DBs
Position
complement(922790..924115)
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AA seq
441 aa
AA seq
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MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLQHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLSEAKR
LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGVWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAGANELPDQVPEEVKEERW
NRFMQLQQQISAERLQEKVGREILVIVDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP
GDIVRVKVENADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgtaacccaccagccaaagatcggcttcgtttccctgggctgtccgaaaaac
ctcgttgattcggaacgcatcctgactgagctgcgtaccgaaggctatgacgttgtgcca
cgctatgacgatgcggatatggttatcgttaatacctgtggctttattgacagcgcggta
caagagtcactggaagccattggcgaagcgctgaacgaaaacggtaaggtaatcgtcacc
ggctgcctgggcgcaaaagaagatcagatccgcgaagtgcatccgaaagtactggaaatc
accgggccgcatagctatgagcaagttctgcagcacgtacatcattacgtaccgaagccg
aagcacaatccatttttaagcctcgtaccggaacagggtgtaaaactgacgccgcgccat
tatgcgtatctgaaaatttctgaaggctgtaatcaccgctgcacgttctgcatcatcccg
tcgatgcgcggggatctggtcagccgcccgattggcgacgtattaagcgaagcgaaacgt
ctggttgatgccggggtcaaagagattctggtgatttcgcaagatacctccgcctacggc
gtagatgtgaagcaccgcaccggattccataatggcgaaccggtgaaaaccagtatggtg
agcctgtgcgaacagttatcaaaactgggcgtctggacacgtctgcactacgtctacccc
tacccacacgttgatgatgtgattccgctaatggcggaaggcaaaatcctgccttatctg
gacattccgctgcaacatgccagcccgcggattcttaaactgatgaaacgtcccggttcc
gttgaccgccagctggcgcgcattaagcagtggcgcgaaatctgcccggaactgacccta
cgctccacctttattgtcggcttccccggcgaaacggaagaagacttccagatgctgctc
gacttcctgaaagaggcgcgcctcgatcgtgtaggctgcttcaagtacagcccggtggaa
ggcgcaggcgcgaatgagctgccggatcaggtgccggaagaggtgaaagaagagcgctgg
aaccgctttatgcaactgcaacagcaaatctccgctgagcgcttgcaggaaaaagtgggc
cgcgaaattctggtgatcgttgatgaggttgacgaagaaggcgctatcgggcgtagcatg
gcggatgcgccggaaattgacggcgcggtctatttgaacggcgaaaccaacgtcaagccg
ggcgatatcgtgcgcgtgaaagtggaaaacgccgacgaatatgatttgtggggcagtcgg
gtttaa
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