Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_1060
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Entry
SL1344_1060 CDS
T01724
Symbol
ycdC
Name
(GenBank) hypothetical transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
sey
Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Brite
KEGG Orthology (KO) [BR:
sey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sey03000
]
SL1344_1060 (ycdC)
Transcription factors [BR:
sey03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SL1344_1060 (ycdC)
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Ortholog
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GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
CBW17156
UniProt:
A0A0H3NA42
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All DBs
Position
1162830..1163468
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AA seq
212 aa
AA seq
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MSQRTEKKIGKRSQATGAKRQLILTAALAVFSQYGIHGARLEQVAERAGVSKTNLLYYYP
SKEALYVAVMRQILDVWLAPLKAFRAEFSPLEAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMEELTGDLKALIDEKSALIAGWVHSGKLAPISPHHLIFMIWAATQHYADFAPQV
EAVTGATLRDEAFFNQTVESVQRIIIEGIRVR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacgcacagagaaaaaaatcgggaaacgctcgcaggccaccggtgcaaaacgg
cagcttatcttaaccgccgcgcttgctgttttttcccagtatggcattcatggcgcgcgt
cttgagcaggtcgccgagcgggcaggcgtctccaaaaccaatctgctttattattatccc
tcgaaagaggcgctgtatgtcgcggtaatgcgacagattctggatgtctggctggcgccg
ctcaaggcgtttcgcgcagaattttcccctctggaggccatcaaagagtatatccgtctc
aagctggaagtttcgcgtgattatccgcaggcgtcgcggctcttctgcatggagatgctg
gcgggcgcgccgctcttaatggaggaactgaccggcgatctaaaagcgttgatagatgaa
aaatccgcgctgattgccggatgggtgcacagcgggaaactggcgcccatttctccgcac
catttgatcttcatgatttgggccgccacgcaacattacgccgattttgcccctcaggtt
gaggcggtaaccggcgcgacgcttcgcgatgaagccttttttaaccaaacggtcgaaagc
gttcagcgcattattattgaagggattcgcgtgcgttaa
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