Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_2612
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Entry
SL1344_2612 CDS
T01724
Symbol
yfiF
Name
(GenBank) hypothetical RNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
sey
Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Brite
KEGG Orthology (KO) [BR:
sey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sey03009
]
SL1344_2612 (yfiF)
03016 Transfer RNA biogenesis [BR:
sey03016
]
SL1344_2612 (yfiF)
Ribosome biogenesis [BR:
sey03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SL1344_2612 (yfiF)
Transfer RNA biogenesis [BR:
sey03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SL1344_2612 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
CBW18714
UniProt:
A0A0H3NEM8
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All DBs
Position
complement(2787826..2788863)
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AA seq
345 aa
AA seq
DB search
MNDELKNKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPAKSRTDGGRRPARDERNNQSR
DRKHETSPWRTVSRAPGDETPEKVDHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF
QSRPDAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELAKASGTEHHGGVCFLIKK
RNGTTVKQWVKQAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI
RTAEGGAEHVQPITGESIVDVLDDFRQAGYTVVTTSSDRGQALFSTTLPEKMVLVLGREY
DYLPEAAREPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgaattaaaaaacaaaagcggcaaagtcaaagtgatgtatgtccgtagtgat
gatgactctgataaacgcacccataacccgcgtaccgggaaagggggaggccgcccagca
aagtctcgcactgacggtggacgtcgccccgcccgtgatgagcgaaataatcagagccgt
gaccgtaaacatgaaacttcgccgtggcgcaccgtgtcccgcgcgccaggcgatgaaacg
cctgagaaagtcgatcatggtggtattagcggtaaaagttttattgaccctgaagttttg
cgtcgccagcgtgcggaagagacgcgcgtctacggtgaaaacgcctgccaggcgctattc
cagagccgtcctgacgccatcgtgcgcgcatggtttatccaaagcgtaacgccgcgtttt
aaagaggcgctgcgctggatggcggcgaatcgtaaagcctaccatgtggtggatgaagcc
gaactggcaaaagcttccgggactgagcaccacggtggcgtgtgtttcctgattaaaaag
cgtaacggtacgaccgttaagcaatgggtaaagcaggcggcggatcaagactgcgtgctg
gcgttggaagatgtcgctaacccgcataatctgggcggcatgatgcgtagctgcgcgcac
ttcggcgtgaaaggcgtggtggtacaggatgcggcgttgctggagtccggcgcggcgatt
cgtaccgcggaaggcggggcggagcatgtccagccgatcactggtgaaagcattgttgac
gtactggatgattttcgtcaggcggggtacaccgtggtgacgacgtccagcgatcgcggt
caggcgctctttagtacgaccctgccggaaaagatggtgctggtcttaggccgtgaatat
gactacctgccggaagcggcgcgcgaacccgacgatctgtgcgtgaaaattaacggcacc
gggaacgtggaaagcctgaatgtgtcggttgcgacaggcgtactgctcgccgagtggtgg
cgacagaataaagcgtaa
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