KEGG   Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_2923
Entry
SL1344_2923       CDS       T01724                                 
Symbol
ygcB
Name
(GenBank) conserved hypothetical protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
sey  Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Brite
KEGG Orthology (KO) [BR:sey00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sey02048]
    SL1344_2923 (ygcB)
Enzymes [BR:sey01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SL1344_2923 (ygcB)
Prokaryotic defense system [BR:sey02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    SL1344_2923 (ygcB)
SSDB
Motif
Pfam: Cas3-like_C_2 Cas3_HD DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: CBW19022
UniProt: A0A0H3NR58
LinkDB
Position
complement(3106052..3108715)
AA seq 887 aa
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQ
AAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSEC
PELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKAL
FPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQAL
AKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGA
GKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHS
ARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMA
VMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQ
RDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSE
EACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRI
ESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIR
DRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILR
EQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCA
EISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEF
EKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
NT seq 2664 nt   +upstreamnt  +downstreamnt
gtgtcgatatatcactattggggaaagtctcgacgaggagaaactgacggcggtgatgat
taccatttgctttgctggcattctttagatgttgcggctgtgggttactggatggtgata
aataatatttattttattgaccactatctaaaaaaattaggcatccaggataaggagcag
gcggcgcaattttttgcctggattttatgttggcatgatattggaaagtttgctcattcc
ttccagcaactataccgtcatgaggctttaaatatctttaatgagcctacacggcattat
gaaaaaatcgcgcataccacgctgggatacatgttgtggaactcctggctaagtgaatgc
cctgaattgtttcctccttcttcgctttcagttcgtaaaagtaagcgcgttatggcgctt
tggatgccagtcactacaggtcatcatggacgccctccagaggcaatccaggagctggac
cattttcgccagcaggataaagacgcggcaagagattttcttctgagaataaaagcgctc
tttcctttaattactttgcctgaagcctgggatgaagatgagggtatcgaccaatttcag
caactttcctggtttatttccgctgcggttgtactggctgactggactggttctgccagc
cgttattttccgcgtactgcggaaaaaatgcctgttgatacctactggcagcaagctctc
gctaaagcacaaactgccatcacgctatttccctcagcggcgaatgtgtctgcctttacg
ggcatagaaacgcttttcccttttattcagcatcccacaccgttacaacaaaaggcgctt
gagctggatatcaacgtggatggcgcccaactctttattcttgaagatgtcaccggggcc
ggaaaaacagaggcggcgctcatattagctcatcgactgatggcggcaggtaaagcgcag
ggactctattttggactgccgacaatggcgacagccaacgcgatgtttgaacgtatggcg
aacacctggctggcgctgtatcagccggactcccgtcccagcctgattctggcgcatagc
gcgcgtcgcttaatggatcgtttcaatcagtcaatatggtcggtcactctttctggtacg
gaagaacccgatgaagcgcagccttatagtcagggatgcgccgcctggtttgccgacagc
aataaaaaagcgttgttggcggaggttggcgtaggcacgttggatcaggcgatgatggcg
gtaatgccatttaaacataacaacctgcggttactgggtcttagcaacaagatcttactg
gctgatgagatccatgcctgtgatgcctggatgtcccgaatacttgaaggtttgatcgaa
cggcaggccagtaatggcaacgccactattctgttatctgcgacgctatcgcagcagcag
cgagataagctggtggcggcattttcccgtggggtgaggcgtagtgtgcaggcgccgttg
ctaggccatgacgattatccctggctgactcaggtcacacaaacagagctgatttctcag
cgggttgatacacgcaaagaggttgagcgttgcgtagatattggctggctacatagtgaa
gaggcgtgtcttgaacgtataggtgaagcagtggaaaaaggaaactgtatcgcctggata
cgtaactccgttgatgatgcgattcgtatctatcgccagcttcaactgagtaaggtcgtc
gtcacggaaaaccttttactcttccatagtcgctttgctttttacgatcgtcagcggatt
gagtcacagacgctgaatctctttggcaaacagagcggcgcgcaacgtgccggtaaggtc
attatcgccacgcaggtcatcgaacaaagtctggatattgactgcgatgagatgatctct
gatttagcgccggtggatttattaattcagcgggccggtcgactacagcgtcatattcgc
gatcgtaacggtctggtgaaaaagagtgggcaggatgagcgagagacgccagtgctgcgc
attcttgctccggagtgggatgacgcgccgcgagagaactggttatccagcgccatgcgt
aacagcgcctatgtctatcccgatcatgggcgcatgtggctgacacagcgcatattacgt
gagcaggggacgattcggatgccgcaatctgcccgattgttgattgagtcggtctacggc
gaggatgtcaacatgccggttggatttgcaaaaaccgagcaattgcaggaaggcaaattt
tattgcgaccgggcatttgccggccagatgctgcttaactttgcgccgggctactgtgct
gaaattagcgattctttaccggagaaaatgtcaacgcggctggcggaagagtctgtcacg
ctgtggctggcgaaaatcgtggatagcgtcgtaaccccttatgccagcggtgaacacgcc
tgggagatgagcgtgctgcgagtacgtcagagctggtggaataaacataaagacgagttt
gaaaaattagacggcgaacccttgcgtaagtggtgtgcgcaacagcatcaggataaggat
tttgccacggtgattgtggtgacggactttgccgcttgtggttattcggcgaatgaggga
ttgattggcatgatgggggaataa

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