Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_3348
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Entry
SL1344_3348 CDS
T01724
Symbol
yhdA
Name
(GenBank) hypothetical lipoprotein
KO
K18765
RNase E specificity factor CsrD
Organism
sey
Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Brite
KEGG Orthology (KO) [BR:
sey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sey03019
]
SL1344_3348 (yhdA)
Messenger RNA biogenesis [BR:
sey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SL1344_3348 (yhdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GDPD
Motif
Other DBs
NCBI-ProteinID:
CBW19443
UniProt:
A0A0H3NGK5
LinkDB
All DBs
Position
complement(3566287..3568227)
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAVQYKYVSRVQATATAIDTHLVTHDIVS
LTPQIDELMIASDIVRVDLLQGERSVYSHSRARGYRPAGTSDMYRELVVPLIKHPGMSLR
LAYQDPMGNYFHSLITTAPLTLAIGFIVLILFLSVRWLQRQLSGQELLEIRSTRILNGER
GANVRGSVYEWPARTSSALDVLLSEIQFAHEQRSRLDTLIRSYAAQDTKTGLGNRLFFDN
QLATLLEDQEKVGVHGVVMMIRLPDFNLLRDSLGGNQAEEQMFMLINLLSTFIMRYPGSL
LARYHRSDFAVLLPHRTLKEAESIAGQLLKAVDALPANKMLDRDDMVHIGICAWRSGQST
EQVMEHAEAAARNAALQGGNSWAIYDDTLPEKGRGNVRWRTLIEQMLNRGGPRLYQKPAV
TREGRVHHRELMCRIYDGKEEVSSAEYMPMVLQFGLSEEYDRLQISRLITLLGYWPDENL
AMQLTVESLIRPRFQRWLRDTLMQCEKSQRNRIIIELAEADVCQHISRLQPILRLVNALG
VRVAVTQAGLTLVSTSWIKALNVELLKLHPSLVRNIEKRTENQLLVQSLVEACAGTPTQV
YATGVRSRGEWQTLTKRGVAGGQGDFFASSQLLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcttttatcacgctgctcacggggttaacgatcttc
gtgactctgataggttgctcgctaagcttttataacgccgtacagtataagtatgtcagc
cgtgtgcaggcgacggcgacagccattgatacgcacctggtgacccatgatattgtctcg
ctgacgccgcaaatcgacgaactcatgatcgcttccgatattgtgcgtgtcgatctgttg
cagggggagcgcagcgtctacagccattctcgtgccagaggttatcggccagccggcacc
agcgacatgtatcgcgagctggtcgtaccgctgataaaacatccaggaatgtcgctacgt
ctggcttatcaggacccgatgggtaactattttcactcactgatcaccacggcgccgcta
acgctggcgatcggttttatcgttctgattttgtttttatcggtgcgctggctgcagcgg
cagctttccgggcaagagcttctggaaattcgctcaacgcgtattctgaacggcgaacgc
ggggcgaatgtccgcggttctgtttacgaatggccagcgcgcaccagtagcgcgcttgat
gtattgctttccgaaattcagtttgctcacgaacagcgtagccgcctggacaccctcatt
cgctcctacgccgcgcaggacaccaaaaccggactcggtaaccgtctgttctttgataac
caactggcgacgctgctggaagatcaggaaaaagtgggagtgcatggcgtggtgatgatg
atccgcttgccagacttcaatcttctgcgcgacagcctgggaggcaatcaggcggaagag
cagatgtttatgcttatcaatctgctatcgacatttattatgcgttaccctggctcgctg
ctggcgcgttatcaccgcagcgactttgccgtgctgctaccgcatcgaacgctgaaagaa
gcggaaagtattgccggacaacttttaaaagctgtcgatgcgctaccggctaacaaaatg
ctcgatcgtgacgatatggtacatatcggcatttgcgcctggcgcagcggacagtccacc
gagcaggtgatggaacatgctgaagccgcggcgcggaatgccgccctgcaggggggaaat
agctgggctatctacgacgacactctgccggaaaaagggcgcggcaatgtgcgctggcgc
acattgattgagcagatgctgaaccggggtggaccgcgactttatcaaaaaccagcggtc
acgcgagaaggtcgcgtacatcatcgggaattgatgtgtcgcatctatgacggtaaagaa
gaggtgagctcggcggagtatatgccgatggtgctgcaatttggtttatcggaagagtat
gacagattacaaattagccgcctgattacgttgctgggctactggccggatgaaaatctg
gcaatgcagttgacggttgagtcgctgattcgtccgcgttttcagcgctggttgcgcgat
acgttaatgcagtgtgaaaaatcacagcgaaatcgcataattattgaacttgcggaggca
gatgtttgtcaacacatcagtcggttacaacccatccttcgcttagtcaatgcgcttggc
gttcgggtggcggtgacacaggcgggtttgacgctggttagcacgagctggattaaagcg
ctcaatgtggaattactcaagctgcatccgagtctggtcagaaacattgagaagcgaacg
gaaaaccagcttctggttcaaagtctggtagaggcctgcgcgggcacgcctacgcaggtt
tacgcgacaggcgtccgttcgcgcggcgagtggcagacgctgacaaaacgcggcgtggct
ggcgggcagggtgatttttttgcctcctcccaactacttgacacaaacgtgaaaaaatat
tcgcaaagatactcggtttaa
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