Streptococcus equi subsp. zooepidemicus ATCC 35246: SeseC_00390
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Entry
SeseC_00390 CDS
T02355
Symbol
rnhC
Name
(GenBank) ribonuclease HIII
KO
K03471
ribonuclease HIII [EC:
3.1.26.4
]
Organism
sezo
Streptococcus equi subsp. zooepidemicus ATCC 35246
Pathway
sezo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sezo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SeseC_00390 (rnhC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sezo03032
]
SeseC_00390 (rnhC)
Enzymes [BR:
sezo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SeseC_00390 (rnhC)
DNA replication proteins [BR:
sezo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SeseC_00390 (rnhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
DUF3378
DUF6482
RnlA_toxin
Motif
Other DBs
NCBI-ProteinID:
AEJ24553
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All DBs
Position
complement(331726..332601)
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AA seq
291 aa
AA seq
DB search
MSSSLIKQLAPYRISNASPYVRLAAKKDGVTLMLYTSGKLVLQGRQAAGLAQELGLQETV
ADQRPAPSSAQDMPLIGSDEVGNGSYFGGIAVVASFVRPEDHALLRQLGVDDSKNLNDKS
IAQIAPVLKKHIQHRALLLSPKKYNEMVGKGKPYNAVSVKVALHNQAIFLLLNDGARPEK
IVIDAFTSQANYDKYLQQEKNHFRNPLTFEEKAEGKYLAVAVSSIIARQLFLDNLDKLSQ
DLGYRLPSGAGRPSDQIASQILAAYGMAGLEHCAKLHFANTKKAQALLKKQ
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcagcctgatcaagcagctagcaccataccgcataagcaatgccagcccctac
gttaggctagctgccaaaaaagatggtgtcacactgatgctgtatacctcaggcaagctg
gtgctgcagggcagacaagcggcaggactggctcaggagcttggattacaagagactgtt
gctgatcaaagacccgccccctctagcgcacaggatatgcccttaattggcagtgatgag
gtgggaaatggctcttattttggaggcattgctgttgttgccagctttgtgcgaccagag
gatcacgccttgctcagacagctcggtgttgatgattctaaaaacctcaatgataagagt
atcgcccagatcgctcctgtcctaaaaaagcatattcaacacagggcgcttttgctatcg
cctaaaaaatacaatgaaatggtaggtaaggggaagccctacaacgctgtttctgtcaag
gttgctcttcataatcaagcgatttttctgctcttaaacgacggagcaagaccagaaaaa
attgtcattgatgccttcacaagtcaggccaattatgacaaatacctacagcaagaaaaa
aatcactttcgtaatcccttgacctttgaggagaaggccgaaggcaaatatctggcagtt
gctgtcagctctatcattgctagacagctatttttagacaatcttgacaagctcagtcaa
gatctgggctaccggttgcctagtggtgctgggcgtccatctgatcagattgccagtcaa
atcttagccgcctatggtatggcaggcttagagcattgcgctaagctgcactttgcaaac
accaaaaaagcccaagcgctactaaaaaaacaataa
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