Streptococcus equi subsp. zooepidemicus ATCC 35246: SeseC_02124
Help
Entry
SeseC_02124 CDS
T02355
Name
(GenBank) ATP-dependent RNA helicase DEAD/DEAH box family
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sezo
Streptococcus equi subsp. zooepidemicus ATCC 35246
Brite
KEGG Orthology (KO) [BR:
sezo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sezo03019
]
SeseC_02124
03009 Ribosome biogenesis [BR:
sezo03009
]
SeseC_02124
Enzymes [BR:
sezo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SeseC_02124
Messenger RNA biogenesis [BR:
sezo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SeseC_02124
Ribosome biogenesis [BR:
sezo03009
]
Prokaryotic type
rRNA helicases
SeseC_02124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
NAT10_TcmA_helicase
ParcG
Motif
Other DBs
NCBI-ProteinID:
AEJ25921
LinkDB
All DBs
Position
complement(1749356..1750699)
Genome browser
AA seq
447 aa
AA seq
DB search
MSFHDYHFKHYIQEALDELGFVEPTEVQQRLIPIVSTGRDLVGESKTGSGKTHTFLLPIF
EKLKEEKEEVQAVITAPSRELATQIFEASRQIAKHSKQEIRIANYVGGTDKQRQLDKLKL
SQPQLVIGTPGRIYDLVKSGDLAIHKASTFVVDEADMTMDMGFLGTVDKIASALPKTIQI
LVFSATIPQKLQPFLRKYLTNPVIEQIKTETVIADTIDNWLLSTKGRDKNEQILATLKAI
QPYLAMLFVNTKERADDLHAFLAANGMKAAKLHGGIPPRERKRIMNQVKNLAFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITFYQPSDDSDIKELEKL
GITFIPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGLVKKKKKKIKPGYKKKIQWAV
DEKRRKQRRAEKRAKGRAERQSRKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcacgattatcactttaagcattatattcaagaggccttagatgagcttggc
tttgtagagccaacagaggttcagcagcgtcttatcccgattgtcagtacaggacgagat
ctagtgggtgagtcaaagacaggctcaggaaagacgcatacctttttgctgcctattttt
gaaaagctcaaggaagaaaaagaagaggttcaagctgtcattacagcacctagccgggag
ctagcaacacagatctttgaggccagcaggcaaattgctaagcactctaagcaggagatt
cgtattgctaattacgttggagggacagacaagcagcgtcagcttgacaagttaaagctt
agtcagccccagcttgtcattggaacgccaggtcgtatctatgatctagtcaagtcagga
gatttagctattcataaggcctctacctttgttgttgatgaggctgatatgacaatggat
atgggctttttaggcactgtggataagattgcttcagcactgccaaagactatccaaata
cttgtattttcagcaaccattccacaaaagctacaaccctttttaaggaagtatttgacc
aatcctgtcattgaacagatcaagacagaaaccgttattgcagatacgattgacaactgg
ctgttatcaaccaagggacgcgataaaaatgagcaaattttggcgactctaaaggctatc
cagccttatctggccatgctttttgtcaataccaaggagagagctgatgacttacatgcc
tttttagcagctaatggtatgaaggcagccaagcttcatggaggtattcctcctagagag
cgcaagcggatcatgaatcaagtcaaaaacctggcatttgaatacattgtggcaacggat
ttggcggcgcgtggtattgatattgagggggttagtcatgtgattaacgacgccattcct
caagacctatccttttttgtgcatcgtgtggggcggacaggtagaaacggcctaccaggg
acagccattaccttttatcagccaagtgatgattctgatatcaaggagctggaaaagcta
ggcattacctttataccaaaggttttaaaaaatggtgagtttcaggatacttacgatcgt
gatcgtcgccagaatcgtgaaaaagcttatcagaaattagacactgaaatgattggtctg
gttaagaaaaaaaagaaaaaaattaaaccgggctataaaaagaaaattcaatgggcagtt
gatgaaaagcggcgcaagcagcgacgagcagaaaaacgtgccaagggacgagcagagcgt
cagtccagaaagcaaagcttttaa
DBGET
integrated database retrieval system
