Streptomyces pratensis: Sfla_0188
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Entry
Sfla_0188 CDS
T01647
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sfa
Streptomyces pratensis
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfa03016
]
Sfla_0188
Enzymes [BR:
sfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Sfla_0188
Transfer RNA biogenesis [BR:
sfa03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Sfla_0188
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ADW01656
UniProt:
A0A8D3WFT1
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All DBs
Position
236653..237249
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AA seq
198 aa
AA seq
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MNEETPPATVRVFVALAPPDRAKDELARELRPAYDTHPHVRWNRIEDWHITLAFLGEIPT
ATVPLLRPPLARLASAHRPPRLALRGSGTFDDRVLWTGVDGDLDELHLLAADVRTAVKGC
GVAFEDRPLRPHLTLARARRGDRSSMAEIAEGVAGFDGRRWPAERLHLVGSNFGRSAGPI
HYRDIEAWALGGGSGPGV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaagagaccccgcccgcgaccgttcgcgtgttcgtcgccctcgccccgcccgac
cgggcgaaggacgagctggcccgggagctgcgccccgcctacgacacgcatcctcacgtg
cggtggaaccgcatcgaggactggcacatcacgctggcgttcctgggcgagatcccgacc
gcgaccgtcccgctcctgcgtcccccgctcgcccgcctcgcgtccgcgcaccgaccgccc
cgtctggcactgcggggcagcggaaccttcgacgaccgggtgctgtggaccggcgtggac
ggcgacctcgacgaactgcacctgctcgccgccgacgtgcgtaccgcggtcaagggctgc
ggtgtcgccttcgaggaccggcccctgcgcccccatctgacgctggcccgtgcccggcgg
ggcgaccggtcctcgatggcggagatcgccgagggggtggccgggttcgacggccggcgg
tggccggccgagcgtctgcacctggtgggcagcaacttcggccgcagcgccgggccgatc
cactaccgcgacatcgaggcctgggccctgggcggcggtagcggtcccggggtctga
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