Streptomyces pratensis: Sfla_1216
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Entry
Sfla_1216 CDS
T01647
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sfa
Streptomyces pratensis
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfa03016
]
Sfla_1216
Enzymes [BR:
sfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Sfla_1216
Transfer RNA biogenesis [BR:
sfa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Sfla_1216
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ADW02667
UniProt:
A0A8D4BAT9
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All DBs
Position
1425344..1426618
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AA seq
424 aa
AA seq
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MTDAQETAADTSLRTTGGAPPDDVAPAPIPLLEPREGIPPVVATDDALARVVADFAAGTG
PVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVGCPDLSALGEALTGSEWILHAATQ
DLPCLRDIGMTPTSLFDTELAGRLAGFPRVGLGAIVENVLGYALEKGHSAVDWSTRPLPD
PWLRYAALDVELLVDLRNALEEELDRQGKLGWALEEFAAIASAPPAPPRKDPWRRTSGMH
KVRRRRQIAVVRELWTARDQVAQRRDISPGKVLGDAAIIEAALALPVNVQALTALPGFGH
RMGRRQLEQWQAAVDRARQLPESELPQPGQQPAGPPPPRSWADKDPAAAARLSAARTAVS
ELAERLHMPQENLITPDTVRRVCWEPPKALTPAAVETALAGHGARHWQIEQVGPLLLRAL
DTGA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagacacatcactgcgaaccaccgggggcgctccc
ccggacgacgtcgccccggcgccgatccccttgctcgagccgcgcgagggaatccccccg
gtggtggcgaccgacgacgcgctggcccgggtggtggcggatttcgccgccggcacgggc
cccgtcgccgtcgacgcggagcgcgcctccggctaccgctacgggcagcgcgcctacctg
gtgcagctgcgccgcgagggcgcggggagcgcgttgatcgacccggtcggctgccccgac
ctgtccgcgctcggcgaggccctcaccggcagtgagtggatcctgcacgcggccacccag
gaccttccctgcctgcgcgacataggtatgaccccgacctcgctcttcgacacggagctc
gccggacggctggcgggattcccgcgtgtcggactgggcgccatagtcgagaacgtcctc
ggctacgccctggagaaggggcactccgcggtcgactggtccacccgccccctgcccgac
ccctggctgcgctacgccgcgctcgacgtcgagctgctggtggacctgcgcaacgccctg
gaggaggagctggaccggcagggcaagctgggctgggcgctggaagagttcgccgcgatc
gcctcggcgccgccggcccctccgcgcaaggacccgtggcgccggacctccggcatgcac
aaggtgcgccgccgccgccagatcgcggtcgtccgggagctgtggaccgcgcgcgaccag
gtggcgcagcgccgtgacatctcccccggcaaggtgctcggcgacgccgcgatcatcgag
gccgccctggcgctcccggtgaacgtgcaggccctcaccgcgctgccgggcttcgggcac
cgcatggggcgccgtcagctggagcagtggcaggcggccgtcgaccgggccaggcagctg
cccgagtccgagctgccgcagcccggtcagcagccggcgggccctccgccgccccgctcc
tgggcggacaaggacccggccgccgccgcccggctgtcggcggcccgtaccgccgtgtcg
gagctcgccgagcggctgcacatgccgcaggagaacctgatcaccccggacaccgtgcgc
cgggtctgctgggagccgccgaaggccctgaccccggccgcggtcgagacggcgctggcc
gggcacggggcgcgccactggcagatcgaacaggtcggccccctgctgctgcgcgccctg
gacaccggcgcctga
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