Streptomyces pratensis: Sfla_1727
Help
Entry
Sfla_1727 CDS
T01647
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sfa
Streptomyces pratensis
Pathway
sfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sfla_1727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfa03400
]
Sfla_1727
Enzymes [BR:
sfa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Sfla_1727
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Sfla_1727
DNA repair and recombination proteins [BR:
sfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sfla_1727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Auto_anti-p27
zf-FPG_IleRS
DUF7573
DZR
Motif
Other DBs
NCBI-ProteinID:
ADW03163
UniProt:
A0A8D3WE33
LinkDB
All DBs
Position
complement(2110110..2110967)
Genome browser
AA seq
285 aa
AA seq
DB search
MPELPEVEVVRRGLERWTAGRTVEAVEVLHPRAVRRHLAGGADFAARLRGLRFGTAMRRG
KYLWVPLDEADSSLLGHLGMSGQLLVQPEDAVDEKHLRIRIRFDDALGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHLALRLRRTTVKRALLDQSLISGVGNI
YADEALWRSRLHYERPTASLTRPRTAELLGHVRAVMREALDQGGTSFDSLYVNVNGESGY
FDRSLDAYGREDEPCRRCGTPMRRRPWMNRSSYFCPRCQRPPRIS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgaggtcgaagtcgtgcggcggggcctggaacgctggaccgccgga
cgcaccgtcgaggccgtcgaggtcctgcatccgcgtgcggtccgccggcacctcgccggc
ggcgccgacttcgcggcccggctgcgcggtctgcggttcggcacggcgatgcgccgcggc
aagtacctctgggtgcccctcgacgaggcggactcctcgctcctgggccatctcggcatg
agcggtcagctgctcgtgcagcccgaggacgccgtggacgagaaacacctgcgtatccgg
atccgcttcgacgacgcgctcggcaccgagctgcgcttcgtcgaccagcgcaccttcggc
gggctgtcgctgcacgacaacacccccgacggcctgcccgacgtcatcgcccacatcgca
cgcgaccccctcgacccggccttcgacgacgccgccttccacctcgcgctgcgtctgcgc
cgtacgacggtcaagcgggccctgctggaccagtccctgatcagcggcgtcggcaacatc
tacgccgacgaggcgctctggcgcagccggctccactacgagcggccgaccgcgagcctg
acgcgcccgcggacggcggagctgctcggccatgtccgggcggtgatgagggaggccctc
gaccagggcggtaccagcttcgacagcctgtacgtcaacgtgaacggtgagtccggctac
ttcgaccggtccctggacgcgtacgggcgggaggacgagccctgccgccgctgcggtacg
ccgatgcgccggcggccctggatgaaccgcagcagctacttctgcccgcgctgccagcgt
ccgccacggatctcctga
DBGET
integrated database retrieval system
