Streptomyces pratensis: Sfla_1981
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Entry
Sfla_1981 CDS
T01647
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sfa
Streptomyces pratensis
Pathway
sfa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Sfla_1981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfa03400
]
Sfla_1981
DNA repair and recombination proteins [BR:
sfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Sfla_1981
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Saf4_Yju2
Motif
Other DBs
NCBI-ProteinID:
ADW03415
UniProt:
A0A8D3WER5
LinkDB
All DBs
Position
complement(2408265..2409395)
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AA seq
376 aa
AA seq
DB search
MRSIWNGSIAFGLVSIPVKLMNATENHSISFRQIHLSDGGRIRYHKVCELDEEEVPASET
VKAYEDADGSVIPVTDEDLASLPLPTARTIEIEGFVPASAIDPLQLDSAYYLSANGVPAA
KPYALLREALRRSGRVAVAKYALRGRERLGMLRVVDDVIAMHGLLWPDEIRAPEGVAPDA
DVKVRDAELDLADALMNTLGDADLETLHDDYREAVEELVAAKAAGEPVTREAAEEPEGKV
IDLMAALENSVRAAEESHGEDGGVADVHPIGSGGGGGAKRSGAASKKAPARRTGPGKTAA
GRTSTDKAAVSKASAGKTSASGTAAKAPAAKSPKAGKPPAKQTTAKKATAKKTTAKKAAT
KATAKTSRGARKRTSA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtccatctggaacggctccatcgcgttcggcctggtcagcattccggtcaagctg
atgaacgccaccgagaaccactcgatctccttccggcagatccacctctccgacggcggc
cggatccggtaccacaaggtctgcgagctcgacgaggaggaggtaccggcctccgagacc
gtcaaggcgtacgaggacgccgacggctcggtgatccccgtgaccgacgaggacctcgcc
tcgctgccgctccccaccgccaggacgatcgagatcgagggcttcgtgccggcctcggcc
atcgaccccctccagctggattcggcgtactacctctcggccaacggtgtcccggccgcc
aagccgtacgccctgctgcgcgaggccctcaggcgcagcggcagggtggccgtcgcgaag
tacgcgctgcgcgggcgggaacggctcggcatgctgcgggtggtcgacgacgtgatcgcg
atgcacggcctgctgtggccggacgagatccgcgcccccgagggcgtcgcccccgacgcg
gacgtcaaggtccgcgacgcggaactggacctggcggacgcgctgatgaacaccctcggc
gacgccgacctggagacgctccacgacgactaccgcgaggcggtcgaggaactggtcgcg
gcgaaggcggccggggagcccgtcacccgggaggcggccgaggaacccgagggcaaggtg
atcgacctgatggcggcgctggagaacagcgtccgggcggcggaggaatcccacggggag
gacggcggggtcgcggacgtccaccccatcgggtcgggcggaggcggcggtgcgaagagg
tccggggcggcctcgaagaaggccccggccaggaggacggggccggggaagacggccgcc
ggcaggacgtccacggacaaggcggccgtgagcaaggcgtctgccgggaagacgtccgcg
agcgggacggcggcgaaggcaccggccgcgaagagcccgaaggccggcaagccgcccgcg
aagcagacaacggcgaagaaggccacggcgaaaaagaccacggcgaagaaggcggcgacg
aaggccaccgcgaagacctcccggggcgcacggaagcgcacctccgcctga
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integrated database retrieval system