Streptomyces pratensis: Sfla_2534
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Entry
Sfla_2534 CDS
T01647
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sfa
Streptomyces pratensis
Pathway
sfa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sfla_2534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfa03021
]
Sfla_2534
03400 DNA repair and recombination proteins [BR:
sfa03400
]
Sfla_2534
Enzymes [BR:
sfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sfla_2534
Transcription machinery [BR:
sfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sfla_2534
DNA repair and recombination proteins [BR:
sfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sfla_2534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
ADW03963
UniProt:
A0A8D3WHF3
LinkDB
All DBs
Position
complement(2992448..2996347)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQVENRRDSDLENRAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELL
YRELRDRFGTYFDGCMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNKPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEGRNVKGT
DRAFGSTAEATMAFDARELSLQAKVDIRFPVGTMPPRGWVPPVAEEGEPEYQPGDTFRLR
TSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAISDVVVPEAKKAIVKGYEEQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLT
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLKIAVKG
ADGVLRKTEDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDALVGAGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAKGRVRIEETEKTKKLVVTPDDGSEETAFPISKRARL
LVGEGDAVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggccttgccaccgcggacgacatc
cggacctggtcccacggcgaagtgaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcgcatgggccacatcgagcttgccgctccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctcggctacctgctggacctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgttcgtcgac
gaggagcgccgtacgcgcgacctcccgtcgctggaggcgcacgtctccgtcgagcgtcag
caggtcgagaaccgccgcgactcggacctcgagaaccgcgccaagaagctcgagaccgac
ctggccgagctcgaggccgagggtgccaaggccgacgtgcgccgcaaggtgcgcgaaggc
gccgagcgtgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgtctcgac
gaggtgtggagccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctgcatgggcgccgccgcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacaagcccaagggcatggtgctcgactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtggacgcc
ctcttcgacaacggtcgtcgtggtcgcccggtcaccggtcccggcaaccgccccctgaag
tccctcagcgacatgctgaagggcaagcagggtcgtttccgtcagaacctcctcggcaag
cgcgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctcaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcggccgc
accgtggtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccaccctgcaccgcctcggcatccaggccttcgagccccagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagccggccgacggtcgtcccgtcaccatgccgacccaggac
atggtgctgggcctcttcttcctcaccacggacgaagagggccgcaacgtcaagggcacg
gaccgcgcgttcggctccacggccgaggccaccatggccttcgacgcccgcgagctgtcg
ctccaggccaaggtcgacatccgcttcccggtgggcacgatgcccccgcgtggctgggtg
ccgccggtcgccgaggagggcgagcccgagtaccagccgggtgacaccttccggctgcgt
acgagcctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggtttccactgggcgacc
cgctccggtgtgaccgtggccatctccgacgtcgtcgtgcccgaggccaagaaggccatc
gtcaagggctacgaggagcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcactcaggagctcatcgcgatctggaccaaggcgaccaacgaggtt
gccgaggcgatgaacgcgaacttcccgaagacgaaccccatcttcatgatggtcgactcg
ggtgcccgaggaaacatgatgcagatgcgtcagatcgcgggtatgcgtggtctggtgtcg
aacgccaagaacgagacgatcccccgtcccatcaaggcgtccttccgtgagggcctcacc
gttctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtcatc
atccgcgaggaggactgcggcaccgaccgcggcctcaagctgaagatcgccgtcaagggt
gcggacggtgtcctgcgcaagacggaggacgtcgagacctcggtctacgcccgcatgctc
gccgaggacgtcgtcgtcgacggcaaggtcatcgcgcctgccaacgtcgacctcggtgac
gtcctgatcgacgccctcgtgggcgccggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggcacctgtgccttctgctacggacgctcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggcgggtgacgacatcacg
cagggtctgccccgtgtcgtcgagctcttcgaggcgcgtacccccaagggtgtcgccccg
atctcggaggccaagggccgggtccggatcgaggagaccgagaagaccaagaagctcgtc
gtcaccccggacgacggcagcgaggagacggcgttcccgatctccaagcgtgcccgtctc
ctggtcggcgagggcgacgcggtcgaggtgggccagaagctcaccgtcggtgccacgaac
ccgcacgacgtgctgcggatcctcggtcagcgcgcggtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgtgtgacgatcatcgagtccggcgacgcggagctgctgccg
ggcgagctcgtcgagcggtcgaagttcgagaccgagaaccgtcgtgtggtcaccgagggc
ggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcctcgctcgccacc
gagtcgtggctgtcggcggcgtccttccaggagacgaccagggtcctgaccgacgcggcg
atcaacgccaagtcggactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
acgggctccggccaggccgtcccgctggaggactacgactacggtccgtacaaccagtag
DBGET
integrated database retrieval system
