Streptomyces pratensis: Sfla_3050
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Entry
Sfla_3050 CDS
T01647
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
sfa
Streptomyces pratensis
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfa03021
]
Sfla_3050
Transcription machinery [BR:
sfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sfla_3050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
GerE
NirdL-like_HTH
HTH_Crp_2
MarR
HTH_5
HTH_3
DUF134
HTH_Tnp_4
HVO_2718
DUF7343
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ADW04475
UniProt:
A0A8D3WL43
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All DBs
Position
3542692..3543549
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AA seq
285 aa
AA seq
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MPASTAPQVPPQNVQTDDIQTETPDPAAPARTRGADTRALTQVLFGRLKGLEPGTTEHHR
VRTALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPERGVQFPTFAMPT
VVGEIKRYFRDNVRTVHVPRRLHELWVQVTGATEDLTTAHGRSPTTGEIAERLKISEDEV
LACIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQR
ILLLRYYNNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccagtacagcgcctcaagtcccgccccagaacgtccagacggacgacatccag
accgagacccccgaccccgccgcgcccgccaggacccggggcgccgacacccgggcactg
acccaggtcctgttcggccgcctcaagggcctcgaacccggcaccacggagcaccacagg
gtgcgcaccgcgctgatcgaggcgaacctgccgctcgtacgctacgcggcggcccgtttc
cgcagccgcaacgagccgatggaggacgtggtccaggtcggcaccatcggcctgatcaac
gccatcgaccgcttcgacccggaacgcggcgtccagttccccacgttcgccatgcccacg
gtggtcggcgagatcaagcgctacttccgggacaacgtacggaccgtgcacgtgccgcgg
cggctgcacgagctctgggtccaggtcaccggcgccaccgaggacctgacgaccgctcac
ggccgctcgccgaccacgggggagatcgccgagcgcctgaagatctccgaggacgaggtc
ctcgcctgcatcgaggccggccgctcgtaccacgcgacctcgctggaagccgcccaggag
ggcgacgggctgcccggactgctggaccggctcggctacgaggacccggccctcgccggg
gtcgaacaccgcgacctggtgcggcacctgctcgtacagctgcccgagcgcgagcagcgg
atcctgctgctgcgctactacaacaacctgacgcagtcgcagatcagtgccgaactcggc
gtctcccagatgcatgtgtcaaggcttctggccagaagtttcgcccgtctgcgatcagca
aacaggatcgaagcgtag
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