Streptomyces pratensis: Sfla_4175
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Entry
Sfla_4175 CDS
T01647
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sfa
Streptomyces pratensis
Pathway
sfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sfla_4175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfa03400
]
Sfla_4175
Enzymes [BR:
sfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sfla_4175
DNA repair and recombination proteins [BR:
sfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sfla_4175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
TraI_hel_assoc_N
AAA_16
Helicase_RecD
PhoH
NPHP3_N
PIF1
UvrD_C
TrwB_AAD_bind
Herpes_Helicase
AAA
AAA_12
SLFN-g3_helicase
nSTAND3
HTH_IclR
DEAD
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ADW05584
UniProt:
A0A8D3WIQ4
LinkDB
All DBs
Position
4815088..4817319
Genome browser
AA seq
743 aa
AA seq
DB search
MSNSAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGSLLGAQPGESLRMEGRWA
SHPQFGKQFQVDNYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDIIEQH
PKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQSVGVSTSIAVRIYKKYEDASISVV
KNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSTDQGHCFLPEERL
IADGVKLLQVDTGLVIDCLAELAQDPEGVVREKVPGPEDGQPVTAVYLVPFHRAEISLAA
QVQRLLRTPEDRMPGFQDVDWDKALGWLAGRTGATLAPEQEAAVRLALTRKVAVLTGGPG
CGKSFTVRSVVELARARNARVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
RERPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLRDLLAE
GGPVPAVRLTTIFRQAQKSGVVTNAHRINSGVPPLTQGLDDFFLFVEDETEDAGVLAVDV
AARRIPAKFGLNPRRDVQVLAPMHRGPAGAGHLNGLLQQAITPGRPGLPEKRFGGRVFRV
GDKVTQIRNNYDKGENGVFNGTVGVVTALDADEQRLTVLTDEEEEIAYDFDELDELAHAY
AMTIHRSQGSEYPAVVIPVTTSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVS
AGRRCTALDFRLSGGTAEDFPEK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactccgccgtgctcgaaggcgtcctggagcgcatcacctacgccaacgaggag
aacggctacaccgtggcccgcgtcgacacggggcgcggtgcgggggacctgctcaccgtc
gtcggctcgctcctcggtgcccagcccggcgagtccctgcggatggaggggcgttgggcc
tcgcacccgcagttcggcaagcagttccaggtcgacaactacacgacggtcctcccggcg
accatccagggcatccgccgctacctcggatcgggcctgatcaagggcatcgggccggtc
atggccgaccgcatcaccacccacttcggcgtcgacaccctggacatcatcgagcagcac
ccgaagcgcctcgtggaggtgcccggactcggcccgaagcggacgaagatgatcgccgcg
gcctgggaggaacagaaggcgatcaaggaggtcatggtcttcctccagagcgtcggcgtc
tccacctccatcgccgtccgcatctacaagaagtacgaggacgcctcgatctccgtcgtg
aagaaccagccctaccggctggccgccgacgtctggggcatcggattcctcaccgccgac
cgcatcgcgcaggccgtcggcatcccgcacgacagccccgagcgggtcaaggccgggctc
cagtacgccctttcgcagtccaccgaccaggggcactgcttcctgcccgaggagcggctg
atcgccgacggggtgaagctgctccaggtcgacacggggctcgtcatcgactgcctggcc
gagctcgcgcaggacccggagggcgtcgtacgggagaaggtgccgggccccgaggacggt
cagccggtcaccgccgtgtacctggtccccttccaccgcgccgagatctccctggccgcc
caggtgcagcgcctgctgcgcaccccggaggaccggatgcccggcttccaggacgtcgac
tgggacaaggcgctcggctggctcgcggggcgtacgggggccacgctcgcccccgagcag
gaggccgccgtccggctcgcgctcacccggaaggtcgccgtcctcaccggcggccccggc
tgcggcaagtcgttcaccgtccggtccgtggtcgagctggcccgcgcgcggaacgccagg
gtcgtgctcgccgcgcccaccgggcgggcggcgaagaggctctcggagctgaccggcgcg
gaggcctccaccgtgcaccggctgctggagctgaaacccggcggggacgcggcgtacgac
cgcgaacggccgctggacgccgatctggtcgtcgtcgacgaggcgtcgatgctcgatctg
ctgctcgccaacaagctcgtcaaggccgtggcgcccggtgcccacctcctcctggtcggc
gatgtggaccagttgccctcggtcggcgcgggggaggtactgcgcgacctgctggccgag
ggcggacccgtccccgccgtccggctgaccaccatcttccggcaggcccagaagtccggc
gtcgtcaccaacgcccaccgcatcaactccggggtaccgccgctgacccaggggctggac
gacttcttcctgttcgtggaggacgagacggaggacgccggagtgctcgccgtcgatgtc
gccgcccgccgcatccccgcgaagttcggcctgaatccccgccgcgacgtgcaggtcctc
gccccgatgcaccgcggccccgcgggcgccggccatctcaacggactgctccagcaggcc
atcacccccggacgcccgggcctgcccgagaagcggttcggaggccgcgtcttccgggta
ggcgacaaggtgacacagatcaggaacaactatgacaagggggagaacggggtcttcaac
ggcacggtcggtgtcgtgaccgcgctcgacgcggacgagcagaggctgaccgtcctcacg
gacgaggaggaggagatcgcgtacgacttcgacgaactggacgaactggcccacgcgtac
gccatgaccatccaccgctcgcagggcagcgagtatccggcggtcgtcatcccggtcacc
accagcgcctggatgatgctccagcggaacctgctctacaccgccgtgaccagggccaag
aagctggtcgtgctggtcggctcgcgcaaggccatcggccaggcggtccgtaccgtttcc
gcaggcaggcgctgtacggcactggatttccggctcagcggcggtacggcggaagacttc
ccggaaaaatga
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