Streptomyces pratensis: Sfla_4988
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Entry
Sfla_4988 CDS
T01647
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sfa
Streptomyces pratensis
Pathway
sfa03030
DNA replication
sfa03430
Mismatch repair
sfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sfla_4988
03430 Mismatch repair
Sfla_4988
03440 Homologous recombination
Sfla_4988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfa03032
]
Sfla_4988
03400 DNA repair and recombination proteins [BR:
sfa03400
]
Sfla_4988
Enzymes [BR:
sfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sfla_4988
DNA replication proteins [BR:
sfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sfla_4988
DNA repair and recombination proteins [BR:
sfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sfla_4988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
PTCB-BRCT
RhoGAP
Motif
Other DBs
NCBI-ProteinID:
ADW06389
UniProt:
A0A8D4BCR1
LinkDB
All DBs
Position
complement(5742520..5743560)
Genome browser
AA seq
346 aa
AA seq
DB search
MGGCRWRPVFSVTMLDDRQTAAPWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARG
DVEDHWYTLVNPERDPGPVWIHGLTSDVLEGAPLFPQVAAELSERLAGRVLVAHNAAFDW
SMIAREYARAAVTAPVEQRLCTIALAKELRLPLPNHKLESLAAHFGVVQQHAHHALDDAR
VLAEAFRPSLHAAAKGGVRLPLLECRPLTEWYDSPVTPRAGYRPSQGQGSWRPSRKRPAC
PYPNPGRYESDKPLMQGMRVAFSGDTSIDRELLEDRAVEAGLHVATSVSRLTSLLVTNDP
DSATSKTVKAKSFGTPVLEESAFTHLLRDVAPAVSVVVPKPSPSSE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggtggctgtcggtggcggcccgtattctctgtgaccatgctcgacgaccgtcagacc
gcagcgccgtggccggccgcctatccccaggggtacgcggtcgtcgacgtggagaccacc
ggactcgcccgcgacgaccggataatctccgctgccgtgtaccgcctggacgcgagaggt
gacgtcgaggaccactggtacacgctggtgaacccggagcgggatcccggccccgtctgg
atccacgggctgaccagtgacgtcctggaaggagcgccgctcttcccgcaggtcgccgcg
gagttgtcggagcggctggccgggcgggtcctcgtcgcgcacaacgccgcgttcgactgg
tcgatgatcgcccgggagtacgcccgggcggcggtcaccgcgcccgtcgagcagcggctg
tgcaccatcgcgctcgccaaggagctgcggctccccctgcccaaccacaagctggagtcg
ctcgccgcgcacttcggcgtggtgcagcagcacgcgcaccacgccctggacgacgcccgg
gtgctggccgaggccttccggccgtccctgcacgcggcggccaagggcggggtgcgcctg
ccgctgctggagtgccggccgctgaccgagtggtacgactccccggtcaccccgcgcgcc
ggctaccggccctcgcagggtcagggcagctggcgtccctcgcgcaagcgtcccgcgtgc
ccgtatccgaatcccgggcgctacgagtcggacaaacctctcatgcagggcatgcgggtg
gccttctcgggagacacctcgatcgaccgtgaactcctggaggaccgcgccgtggaggcc
ggcctgcacgtggcgaccagcgtgtcccggctgacgagtctgctcgtcaccaacgacccg
gactcggcgacgtccaagacggtgaaggcgaagtcgttcggcacaccggtcctggaggag
agcgcgttcacccatctgctgagggacgtggcaccggccgtgtcggtcgtcgtgccgaag
ccgtcgccgtcatcggagtga
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