Streptomyces pratensis: Sfla_5135
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Entry
Sfla_5135 CDS
T01647
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sfa
Streptomyces pratensis
Pathway
sfa00061
Fatty acid biosynthesis
sfa00071
Fatty acid degradation
sfa01100
Metabolic pathways
sfa01212
Fatty acid metabolism
sfa02024
Quorum sensing
sfa04146
Peroxisome
Module
sfa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sfla_5135
00071 Fatty acid degradation
Sfla_5135
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sfla_5135
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sfla_5135
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sfa01004
]
Sfla_5135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfa04147
]
Sfla_5135
Enzymes [BR:
sfa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sfla_5135
Lipid biosynthesis proteins [BR:
sfa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sfla_5135
Exosome [BR:
sfa04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sfla_5135
Exosomal proteins of breast cancer cells
Sfla_5135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF7309
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
ADW06534
UniProt:
A0A8D4BHM1
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All DBs
Position
5908027..5909694
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AA seq
555 aa
AA seq
DB search
MTDSIYAAKPWTALLSEAQLAPVHPAETVVHAFCAAVGRAPEHTALAYFDGRLSYRETDE
LSDSVAGHLAAEGLRRGDRVAVMLQNTPHFVLALLGAWKAGATVVPLNPMYKSGEVGHVL
KDAEVTALICSDRAWDSYLRATAEAAPSVRIALTACELDLQSADDPRVLGFERLPAPGPG
DRARDLVTVARAGLAAPDGRDLTAEDTALISYTSGTSGTPKGAMNSHGNIMVNAERQRAG
HPVDEGSAYFALAPLFHITGMVCQLAACVANAGTLVLAYRFEASVVLEAFAEHRPAYTVG
PSTAFMALAAHPGATREHFASFKVISSGGAPLPPALVEKFREGYGPYIRNGYGLTECTAP
CASVPPEHEAPVDPVSGTLSVGVPGPDTLVRIIDEKGDDVPFGEQGEIAVRGPQVVSGYW
NLPEATEAAFPDGELRTGDIGFMDTAGWLYVVDRKKDMINASGFKVWPREVEDVLHTHPA
VREAAVVGVPDPYRGETVRAYVSLRPGAGTEPGELTAYCRERLAAYKYPREVEILAELPK
TASGKILRRELRSPR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactcgatctacgcggcgaagccctggaccgccctgctcagcgaggcccagctg
gcccccgtgcaccccgccgagaccgtggtccacgccttctgcgcggccgtcgggcgggcc
cccgagcacaccgcgctcgcctacttcgacggacgcctgagctaccgcgagaccgacgaa
ctgtccgactccgtggccgggcacctcgccgccgaagggctgcggcgcggcgaccgcgtc
gccgtcatgctccagaacaccccgcacttcgtcctcgcgctgctcggcgcctggaaggcg
ggcgcgaccgtcgtgccgctcaacccgatgtacaaatccggcgaggtcggtcacgtactg
aaggacgccgaggtcaccgcgctgatctgctccgaccgcgcctgggactcctacctgcgg
gccaccgccgaggccgcgccgagcgtgaggatcgccctcacggcctgcgagctcgacctc
cagtcggccgacgacccgcgcgtgctcggcttcgaacggctccccgcgcccggccccggc
gaccgggcccgcgacctggtgaccgtggcgcgcgccggactcgccgcaccggacggccgg
gacctcaccgccgaggacaccgcactcatcagctacacctccgggacgagcggcaccccc
aagggagccatgaactcccacggcaacatcatggtcaacgcggagcggcagcgggccggc
caccccgtcgacgagggctccgcctacttcgcgctcgccccgctcttccacatcaccggc
atggtgtgccagctcgccgcctgcgtggccaacgcgggcaccctggtcctcgcctaccgc
ttcgaggcgagcgtcgtcctggaggccttcgcggagcaccgcccggcttacacggtgggc
ccctcgaccgccttcatggcgctggcggcgcacccgggggccacccgggagcacttcgcc
tccttcaaggtcatctcctccggcggcgcgccgctgccgccggcgctggtcgagaagttc
cgcgagggctacggcccgtacatccgcaacggctacgggctcaccgagtgcaccgcgccc
tgcgcctcggtcccgcccgagcacgaggcgcccgtcgacccggtgtcggggaccctctcc
gtcggcgtgcccggaccggacaccctggtcaggatcatcgacgagaagggcgacgacgtc
cccttcggcgagcagggcgagatcgcggtacgcggaccgcaggtcgtctccggctactgg
aacctgccggaggccaccgaggccgccttccccgacggggagctgcgcaccggggacatc
ggcttcatggacacggccggctggctgtacgtcgtggaccgcaagaaggacatgatcaac
gcctccggtttcaaggtctggccccgggaggtcgaagacgtcctccacacccatccggcg
gtccgggaggcggcggtggtcggcgttcccgacccctaccgcggggagaccgtccgggcc
tacgtcagcctgcggccgggcgccgggaccgaaccgggcgagctgaccgcgtactgcagg
gaacggctcgccgcgtacaagtacccgcgcgaagtggagatcctggcggagctcccgaag
acggcgagtgggaagatcctcaggcgggaactgcgttcccctcgctag
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