Streptomyces pratensis: Sfla_5942
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Entry
Sfla_5942 CDS
T01647
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
sfa
Streptomyces pratensis
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfa03021
]
Sfla_5942
Transcription machinery [BR:
sfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sfla_5942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
DUF7343
HTH_10
HTH_23
GerE
MarR_2
HTH_3
KORA
HTH_37
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ADW07328
UniProt:
A0A8D3WRK9
LinkDB
All DBs
Position
complement(6812680..6813552)
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AA seq
290 aa
AA seq
DB search
MTAHTAQTAGAERAGASGGLPWIEDAGLIAPRDARRLSRLFFDRLQALDEGTPEHQYARN
TLIEMNLSLVRFAAGRFRNRGSGDMEDIVQVGTIGLIKAIDRFDLAREVEFTSFAVPYIV
GEIKRFFRDTTWAVHVPRRLQELRVDLAKAKEALAVELDRDPTVQELAGYLDLEEEEITE
GLVAANGYTAGSLEMPADAGDHAGRTTAGRTYADVLGEPDPAMETVENLHALAPLLGELD
ARERRIIDMRFGQEMTQAQIGDELGISQMHVSRLLSRILRKLHDGMLAQD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcacactgcacaaaccgccggcgcggaacgagcaggtgcctccggcggactc
ccctggatcgaggacgccgggctgatcgccccgcgggacgcacgaaggctgtcgaggctc
ttcttcgaccggctgcaggccctggacgagggcacccccgagcaccagtacgcacgtaac
accctgatcgagatgaacctgtccctcgtgcgcttcgccgcgggacgcttccggaaccgg
ggcagcggtgacatggaggacatcgtccaggtcggcaccatcggcctgatcaaggccatc
gaccgcttcgacctcgcccgtgaggtcgagttcacgtcgttcgccgtgccgtacatcgtc
ggggagatcaaacgcttcttccgggacaccacctgggccgtccatgtgccgcgcaggctc
caggagctccgggtggacctcgcgaaggccaaggaggctctggcggtggagctcgaccgt
gaccccacggtccaggagctcgccgggtacctcgatctcgaggaggaggagatcaccgag
ggcctcgtcgccgccaacggctacacggccggctcgctggagatgccggccgacgccggg
gaccacgcgggccggacgacggccgggcgcacgtacgccgacgtactgggcgaaccggac
cccgcgatggagacggtggagaacctccacgcgctcgcaccgctgctcggcgagctcgac
gcgcgtgagcgccgcatcatcgacatgcggttcggccaggagatgacgcaggcccagatc
ggcgacgagctcggcatctcccagatgcacgtctccaggctgctcagccgcatcctgcga
aagctccacgacggcatgctcgcgcaggactga
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