Streptomyces pratensis: Sfla_6338
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Entry
Sfla_6338 CDS
T01647
Name
(GenBank) WD40 repeat, subgroup
Organism
sfa
Streptomyces pratensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
nSTAND1
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
PD40
Beta-prop_WDR75_1st
eIF2A
Ge1_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_SCAP
AAA_16
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Nbas_N
MIOS_WD40
Beta-prop_ELP1_1st
PROPPIN
Beta-prop_Nup120_160
B-prop_COPA_B_2nd
PEP5_VPS11_N
DUF7165
Beta-prop_DCAF4
AAA_22
NACHT
AAA_29
DUF7287
WDR54
ABC_tran
ATPase_2
TylF
SMC_N
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ADW07703
UniProt:
A0A8D3WSC6
LinkDB
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Position
complement(7230811..7234374)
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AA seq
1187 aa
AA seq
DB search
MDRRPVKLVLDVLLMLLGALLGMAANYATSQTDHVPWPLRLLREWSVPLVAVVLLLLVAG
QVWLHFLERPVAIARTWNSSQPPYPGLEAFTEDDGGVFFGRDREIRDLVGRLNPSAPARA
HRFVAVIGPSGSGKSSLVRAGLLPALRRRRGRWVITPAFAPGADPLVSFASSVAAVLPDM
TVEQVQTELAQGSAGMQRCLDRLRTARGGGAAPVLLVVDQLEELLTLTGAQDRLAFFSLI
DESLAADPHLWVVATLRSDFLTDFLGTGYAALIHQPTLVGALGRTELFEVIEKPAEQAAL
SFAPGVVARMVDDTEGGDALPLLAYTLQELFLRVSSGGTVTEDDYRRLGGVAGALSEHAD
RITADLRAADADTPVLSTLLKFVTLEHGEPTRRRVHRDDLTPEERTVTDAFVTGRLLTSD
NAVLDVAHEALFRQWAPLRQAVAASTDKLRRRTELERWAQDWERSSRQDAYLLSGERLAV
AREWAGEASEALAGVPLVTAFLERSTRQDRASMERVADAVAHRALESAERDPELAILAAL
AAIDECAPTSAAQQALHTALGASRRRAVFRGHEQDVNAVTWSPDGSRLATASDDGTVRIW
DAREAGNPVVLTRRHGDGVYAVAWSPDGKRLAGGSRNRSVTIWDAETWAEMGVLIGHDDS
VGALAWSPDGDRLATASSDRTVRIWDAETHAELTVLTGHEQPVWDLAWSPGRGQLASASD
DGTVRVWSLTPGGPNTELTGHQASVSAVAWSPDGCCLASVSEDRTALVWNIAVAEEEGRE
PQARKLTSLTPLNCVTWSPDGRHIAVGDDDCTVRVWDTDTSEESQLIGHTDSVHDIAWHG
HRIATVSRDRTVAIWDAPRRGSRTGTLLGHDDSVQNVSWSPDGTRLATASQDGTAVIWDV
AQNSAVATLRHEGAVFDLAWSPDGERLVTASRGAAARIWDVRGRTQLAVLRGHGDELTTV
SWSPDGTRIATASRDSTTRIWNASDGTELTVLRGAKYWIGGAAWSPDSRHLATSSTDRTL
CVWDILRGTAVTTLHGHTDYAWRVAWSPDGRRLASGSRDRTVRLWDPFSGAELVTMTGHQ
ERVQGVAWSPDGRHLATVSWDRTVRLWNPDDGRELTVIGVHDDQVNGLAWHPDGSYLATV
SRDRSVRIWEPTTDMDRLLRLARSRVFRRLTDDERRSFLLPTTRARV
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtggaccgtcgtccggtaaagcttgtcttggacgtcctgctgatgctgctcggggctctg
ttgggcatggcggccaactacgccaccagtcagacggatcatgtcccgtggccactgcgc
ctgttgcgggaatggtcggttcccttggtagcggtcgtgctcttgcttctcgtcgcggga
caggtctggctgcacttcctggagcggcctgtcgcgatcgcgcggacgtggaactcctcg
cagccgccgtaccccggactggaggcattcaccgaggacgatggcggcgtgttcttcggc
cgtgaccgcgagatcagggatctcgtcggcaggctcaatccgtccgccccggcccgtgcg
caccggtttgtcgcggtgatcggtccctccgggagtggtaagtcctcgctggtgcgggcg
gggctactgcccgccctgaggcggcggcgcggccggtgggtgatcacgccggcgttcgca
ccgggcgccgatccgctggtgagcttcgcgtcgagtgtcgctgcggtgctgcccgatatg
accgtcgagcaggtccagacggaactggcccaggggtctgcgggcatgcagcggtgcctg
gaccggctgcgcacggcgcggggcggaggtgccgcgccggtgctcctggtcgtcgaccag
cttgaggaactcctcacgttgaccggagcccaggaccggcttgcgtttttctcgctgatc
gatgagtcgcttgcggcggatccgcatctgtgggtggtggccaccctgcgatcggatttc
cttaccgacttcctgggaaccggatacgccgcgctgattcaccagccgacgctggtcggt
gcgctcggccgcacagaactgttcgaagtgatcgagaaacccgcggaacaggcggccctg
agcttcgctcccggggtcgtggcccggatggtggacgacacagaaggcggggacgcactg
ccgctgttggcgtacacccttcaggagctcttcctgcgggtcagctctggtgggacggtg
acggaggacgactaccgtcgcctgggcggggtcgctggggcactgtccgaacacgcggac
cggatcaccgccgacttgcgtgcggccgacgcggacacgcctgtgctctccacactgctg
aaattcgtgaccctggagcacggcgaaccgacccgccgccgcgtgcaccgcgacgacctc
acacccgaagagcgcaccgtgaccgatgcgttcgtcaccggacgcctgctcaccagcgac
aatgccgtgctggacgtcgcccatgaggcgctcttccgccagtgggccccgctgcgtcaa
gctgtcgcggccagtacggacaagctgcgacgccgtacggagctggaaaggtgggcacaa
gactgggaacgctcgagccggcaagacgcttatctgctgagcggcgaacggctggccgtc
gcacgcgaatgggcaggcgaggcgtccgaagccctcgctggtgtcccgctcgtcaccgcc
tttctggaacgctccacccgccaggacagagcctccatggaacgtgtcgccgacgcggtc
gcccaccgggctctggaaagcgccgaacgtgacccggagttggcgatccttgcggcgctc
gccgccatcgacgagtgcgcgcccacctcggcggcccaacaggcgctgcacaccgctctg
ggcgcctcccggcggcgtgcagtcttccgcggccacgaacaggacgtcaacgctgttacc
tggtcccccgacgggtcgcgactggcgaccgcgtcggacgacggcacggtccggatctgg
gacgcccgggaggccgggaaccccgtggtcctcacccgccgccacggcgacggggtgtac
gccgtggcctggtcgccggacgggaaacggctggccggtggttcgcggaaccgtagcgtc
accatctgggacgccgagacctgggccgaaatgggcgtactcatcggtcatgacgacagt
gtgggggctcttgcgtggtcaccggacggcgaccggctcgccacggcgagcagtgaccgt
accgtacgcatctgggacgcggagacgcatgccgaactgaccgtgctgaccggccacgag
cagccggtgtgggacctggcctggtcacccggccgaggacaacttgccagcgcgtcggac
gacggcacggtgcgcgtctggtccctgacacccggcgggcctaacactgaactgaccggc
caccaggccagtgtctcggccgtcgcctggtcccccgacggctgctgtctcgcctcggtg
tcggaagaccgcacggcgctggtctggaacatcgccgtagcggaggaagaggggagagag
ccccaggcccggaagctcacctcgctgacaccgctgaactgcgtgacgtggtcccctgac
ggccgccacatcgccgttggagacgacgactgcaccgttcgcgtctgggacacagacaca
agtgaggaatcccagctgatcggccacaccgacagcgtccacgacatcgcctggcacggc
caccgcatcgccaccgtctctcgcgatcggaccgtggccatatgggacgcccctcggcgc
ggcagccggaccggcaccctgctcggccacgatgactcggtccagaacgtctcctggtcg
cccgacggcacccgcctcgccaccgcgtcccaggacggcacggccgtgatctgggacgta
gcacagaactctgcggtggccacgctgagacacgaaggtgccgtgttcgacctggcgtgg
tcccccgatggcgaacggctggtcacggcctcccgcggcgccgccgcccgaatctgggac
gtacgcggccggacgcagctcgccgtacttcgcggccacggcgacgaactcacgacggtc
tcctggtcccctgacggcacccgaatagccacggcatcgcgcgacagcaccacccgtatc
tggaatgcctcggacggcaccgaactcaccgtgctccgcggggccaagtactggataggc
ggagccgcatggtcccccgacagccgccaccttgccacctcgtcgaccgataggacgctc
tgtgtatgggacatcctccggggaacggccgtgacgaccctgcacgggcacacggactac
gcgtggcgcgtcgcctggtcacctgatggacgtcgtctcgccagcggctcccgggatcgc
accgttcgcctctgggaccccttcagcggtgccgagctcgtgaccatgaccgggcaccag
gaacgcgttcaaggcgtcgcctggtcgcctgacgggcgacacctggccaccgtgtcctgg
gaccgcacggtacggctctggaaccccgacgacggccgagagctgaccgtcattggggtc
catgacgaccaggtcaatggtctggcatggcatccggacggctcatatctggccaccgtc
tcccgagaccgcagcgttagaatctgggaacccaccacggatatggacagactgctcaga
ctcgcccggtcccgggtcttccgccggctcaccgacgacgaacgccgcagcttcctgctg
ccgacaacccgagcaagagtgtga
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