Sphingobacterium faecium: MUK51_08150
Help
Entry
MUK51_08150 CDS
T08637
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sfae
Sphingobacterium faecium
Pathway
sfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUK51_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfae03019
]
MUK51_08150
Enzymes [BR:
sfae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUK51_08150
Messenger RNA biogenesis [BR:
sfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUK51_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UXD71256
LinkDB
All DBs
Position
complement(1893797..1895014)
Genome browser
AA seq
405 aa
AA seq
DB search
MKFTEFGLASSLEEGLDSMGYEDATPIQEQAIPVVLEHKDLIACAQTGTGKTASYLLPVL
HQIAEEQSDYINTLILVPTRELALQIDQQIMGLGYFTGATSIAVYGGGNGMDYEQQRTAI
KEGANIIVATPGRLIAHLASGKLHFNKVKHFILDEADRMLDMGFHEDIMKIISFLPEKRQ
NLLFSATMPGKIRTLAKQILHNPTEINIALSKPSEGISQQVYMVYDDQKTALIQHILTNP
IYTSTIIFASKKEFVKRLSIDLHKNGIAVEAFHSDLEQVQREDIMNRFKAKKINVLIGTD
VISRGIDIVGISLVINYDVPPDPEDYIHRVGRTARAATTGTAITFVNQKDQQRFAKIEEL
IGSSIEKLPLPAGFSEGPVFDPNRFSEHKKKNTRKKKFKKFVKKD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaatttggtttagcatcttcgttggaagagggcttagatagcatggga
tatgaagatgcaacacctatccaggaacaggcaatacctgttgtgctggagcataaagat
ttgattgcttgcgcgcaaacaggtacgggtaaaacagcatcttatttactacccgttcta
catcagatcgccgaggaacaatccgactatataaatacgttaattttagttccaactcga
gagctggctttacagattgatcagcaaatcatgggtttaggctattttactggagccact
tccatagctgtatacggcgggggaaatggaatggattacgaacagcaacgtacagcaata
aaagaaggagcgaatattatcgtggcaacgcctggtcgcttaattgcacatttggcttca
ggaaaacttcattttaataaagtgaagcattttattcttgacgaagccgaccgtatgtta
gatatgggatttcatgaagatattatgaaaattattagttttcttcctgaaaaaagacaa
aatttattgttctctgccacgatgccaggtaagattagaacactagctaagcaaatatta
cacaatccaacggagatcaatattgctttatcaaaaccttctgaaggtattagtcaacag
gtttatatggtatatgatgatcaaaaaacagcgttgatacaacacattcttaccaaccct
atctatacaagtaccattatttttgcttctaaaaaagaatttgtaaagcgattgtctatt
gatctgcataagaatgggatcgcagttgaggcatttcactctgatttggagcaggtgcaa
cgtgaagatatcatgaatcgctttaaagcaaaaaagatcaatgtattgatcggtactgat
gttatttccagaggtattgatatcgtagggatcagtttggttatcaactatgatgtaccg
ccggatccagaagattatattcatcgtgtgggtcgtactgctcgagcagcgaccacagga
acagcaattacttttgttaatcagaaagatcaacagcgctttgccaagatcgaagagttg
atcggatcaagtattgaaaaactgccactgccagcaggtttttctgaaggtccagttttt
gatccaaatcgtttttcggaacataaaaagaaaaatacaagaaagaagaaattcaaaaaa
ttcgttaagaaagattaa
DBGET
integrated database retrieval system
