Sphingobacterium faecium: MUK51_08320
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Entry
MUK51_08320 CDS
T08637
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sfae
Sphingobacterium faecium
Pathway
sfae03030
DNA replication
sfae03430
Mismatch repair
sfae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUK51_08320 (dnaE)
03430 Mismatch repair
MUK51_08320 (dnaE)
03440 Homologous recombination
MUK51_08320 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfae03032
]
MUK51_08320 (dnaE)
03400 DNA repair and recombination proteins [BR:
sfae03400
]
MUK51_08320 (dnaE)
Enzymes [BR:
sfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUK51_08320 (dnaE)
DNA replication proteins [BR:
sfae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUK51_08320 (dnaE)
DNA repair and recombination proteins [BR:
sfae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUK51_08320 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
UXD71289
LinkDB
All DBs
Position
complement(1931093..1935517)
Genome browser
AA seq
1474 aa
AA seq
DB search
MYIIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDDMGNLLEHDDYLIKPDGYNIPY
DSEKIHGISTELATEQGVPIQEVLVKFNAALAKAKFVVGQNIGFDLNIMGCEFYRYDVHS
PMGEMPILDTCTEVTASLLQLPGGRGGRFKLPNLTELHSYLFGVPFAEAHNATADVEATT
RCFLELVRREVFTPEQLQTDTGYFVDYKQQNPHPIPTVGLKHVNLKAASDAIRQRNKPSG
GQDVVIDHDVLNDFENADFAHLHNHSQFSVLQSTISISSLVESAAKYRMPAVALTDHGNM
MGAFHFVAKVGDHNKAAKAKNEELEAAGESPTEKIIKPIVGCEFFVCDDRLDKKRKDNGY
QIVFLAKNKKGYHNLAKMASVAYTEGFYYVPRIDRKVVEQYKEDLIVLSGNLQGEVPNKV
LNIGENQAEEALLWWKEQFGSDFYIEVMRHGQEDEDRVNTTLVSLARKHDVKLVATNNTY
YINQPDAHAHDILLCVKDGEKLSTPKGRGRGFRFGLPNQQYYFKSAEEMKKIFKDVPDAI
INIQEIVDKIEIFTLYRDVLLPAFDIPEEFQVAEDQEDHGKRGENKYLRYLTFEGAKRRY
KDGLTDDIIERLDFELTTIEKTGYPGYFLIVQDFIAEARKMGVSVGPGRGSAAGSAVAYC
LGITNLDPIQYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMQYVIDKYGSSQVAQIITY
GTMAAKSSIKDTARVLDLPLQEANEIAKLIPNLKLSKIFNMDEKALKETLRADELEAVNR
LIAMSEGAGLEAETIKQARVLEGSMRNTGIHACGVIITPDDITNFVPVSLAKDSDLYVTQ
FDNSVVESAGLLKMDFLGLKTLTLIKDTVANVKLSNGLELNPDEFPIDDQLTYELFQRGE
TVGVFQYESPGMQKHMKDLKPTVFADLIAMNALYRPGPMEYIPSFIKRKHGTEPILYDLD
ACEEYLKETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKQKAVLDKMKPKFVAQA
AEKGHNAKVLEKIWTDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHFPAEYMAAVLSNNM
NDIKQVTFFMEECKRMGLEVLAPDVNESHYKFTVNDRGAIRFGMGAVKGVGAGAVDTIVQ
TRASGPYKSVFDLAKRIDLRAANKKAFESLAYAGGFDSFQNMHRAQYFHAEDNSTGLEKA
IKFAQRFKENENSAQVSLFGGDGSAELPEPVLASCPPWGLIEKLKYEKEVIGIYLTSHPL
DNYKFEIKHFCQNKVSDLQLINKVKASEVEEEVLLDFNRIKNKEVVIGGIIAMANHRIAK
SGKPFGSFIIEDYSDSYEIMVFGEDYVKFKGYLEEGYFVQLRGLVQERFKQVGNWGFEIK
GIQLLSDLREKMAKIFTINIALPALNDMFLEEMKQVLDSNEIEGVVPNCQLRFKIWDPQD
EISIEMPAKLKRINLTNEFLEAIEGFEGVNYRLN
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtacattatatttgatacggaaacaacaggattacccaaacgttgggatgcaccaatt
acagatactgacaattggccgcgatgtattcaaatagcatggcagttacatgatgatatg
ggtaacttgctcgagcatgacgattatttgattaaacctgatggttataatatcccttat
gattcggaaaagattcatgggatttctaccgaattagctactgagcaaggcgttccgatt
caagaggtgctggtaaaatttaatgctgctttggcaaaagccaaatttgttgtcggtcaa
aacattggttttgatttaaatatcatgggttgtgagttttaccgttatgatgtacattca
cctatgggtgaaatgcccatcttagatacctgtaccgaagttaccgcaagtttgctacaa
cttcctggtggacgtggtggacgtttcaaattacctaatctaaccgaacttcactcttat
ctctttggtgtaccttttgctgaggcacataacgcaactgccgatgtggaggcaacgaca
cgatgtttcttggagttggttaggagagaagtttttactcctgagcagctgcaaacggat
acaggttattttgtagattataagcaacaaaatcctcatccaatcccaactgtgggtctg
aagcatgtgaatctaaaagctgcttctgatgcgatacgtcaacgtaacaaaccaagtggc
ggtcaagatgtggttattgatcatgacgtactgaatgattttgaaaatgctgattttgca
catttacataaccattctcagttttcggttctacaatcaacgatctccatcagcagttta
gtggaaagtgctgcaaaatatcgtatgcctgctgttgctctaacggatcatggtaatatg
atgggcgcatttcattttgttgcgaaagttggagatcataataaggcagctaaggccaag
aatgaggagttggaggccgcaggagaaagtcctacagagaaaatcattaagcctatagtt
ggttgtgaattttttgtatgtgatgatcgtctggataaaaaaagaaaagataatggttat
caaattgtcttcttggcaaaaaataaaaagggttatcataatcttgctaaaatggcctct
gtagcttatacagaaggattctattatgttccccgtattgatcgaaaggttgtggagcaa
tataaagaagatttgattgtactatcaggcaatttgcagggtgaagtgccaaataaagtc
ttgaatattggtgaaaatcaagctgaagaagcgctgctgtggtggaaagaacagtttggt
tcagatttttatatcgaagtgatgcgccatggtcaggaagacgaagaccgtgtgaataca
acgttggtgagtctggcccgtaaacatgatgtaaaactagtagccactaataatacatat
tatatcaatcaacctgatgcacatgcccatgatattctactatgtgtcaaagatggtgag
aagttaagcacaccgaaaggtcgtggtcgtggttttcgcttcgggcttcctaatcaacag
tattacttcaaatctgccgaagaaatgaagaaaatatttaaggacgtgccagatgccatc
attaatattcaagaaatcgtcgataagattgagatctttactttgtatcgagatgttctt
ttacctgcatttgatatccctgaagagtttcaggtcgccgaagatcaggaggatcatggt
aagcggggtgaaaataaatacctcagatatctgacttttgagggtgctaaacgacgttat
aaggacggattaaccgacgatatcatagaacgtctagactttgagttgactacaatcgag
aaaacaggttatcctggttattttttgatcgtgcaagatttcatagctgaggcacgtaag
atgggagtttctgtaggacctggtcgtggttcggctgctgggtctgcagtagcttattgt
ttgggaattactaatctagatcccattcagtacgatttactatttgagcgtttcttaaat
cccgatcgtgtatccatgcccgatatcgatattgactttgatgatgagggccgaggtcgt
gtgatgcaatatgtgattgataaatacggttcttctcaggttgcgcagattattacctat
ggaacgatggcagccaaatcgtctattaaagatacagccagagtattagacctgccttta
caggaagccaatgaaattgcaaaattgattccaaatttgaagttgtcgaaaattttcaat
atggatgagaaagccttgaaagagactttacgagcagatgaattggaagccgtaaaccgt
ctaatcgccatgtctgaaggagcgggcttagaggctgaaaccattaaacaggctcgtgta
ctggaaggttctatgcgaaatacaggtatccatgcctgtggggtgatcattactcccgat
gatattaccaattttgttccggtctccttagcaaaagactccgatttatatgtaacacaa
tttgataactcggttgttgagtccgctggcctattgaaaatggatttcttagggttaaag
acacttaccctgattaaagatacggtggcaaacgtcaagttgagcaatggcttagaactg
aatcctgacgaatttccgattgatgatcagttgacttacgagttgttccaaaggggagag
accgtaggggttttccaatatgaatctcctggtatgcagaagcatatgaaggatttgaaa
cctactgtgtttgccgatttaattgctatgaatgcactctacaggccagggccgatggag
tatattcctagttttattaagcgtaagcatggaacagaacctatcttatatgatttagat
gcttgtgaagagtatctaaaagagacttacggaattacggtatatcaagagcaggttatg
cttctatcgcagaaattggctggattttccaaaggtgatgccgatgttttgcgtaaagca
atgggtaagaagcagaaggcggtattggataagatgaaacctaagtttgttgctcaagct
gcagaaaaaggacacaatgccaaagtgttggaaaaaatatggacggattgggaagccttc
gcaagttatgcgtttaataaatctcactcaacctgctatgcttggattgcttatcaaaca
gcttacttaaaagcgcattttccggcggaatacatggctgcagtactctccaataatatg
aatgacatcaagcaggtcacattttttatggaggaatgtaaacgtatggggctggaagtg
ttggctcctgatgtaaatgaatctcattataagtttactgtgaatgatcggggtgctatt
cgatttggaatgggcgctgtaaaaggtgttggtgcaggtgcggtggataccattgtacaa
acgcgagcatctggtccttataaatcggtatttgacttggccaaacgaatcgatctgcgc
gcagcaaataagaaagcatttgaaagtttggcttatgcaggtgggtttgatagttttcaa
aatatgcatcgtgcccaatattttcatgcagaagataattcaacgggattggaaaaagct
attaagtttgctcaacgatttaaagagaatgaaaactcggcacaagtaagtctttttgga
ggcgatggttcagccgaactacctgagcctgttttagcatcttgtcctccttggggactg
atcgagaaattgaaatatgaaaaagaagtgattggaatttatttgaccagtcatccttta
gataattataagtttgagatcaagcatttctgccaaaataaagtcagtgatctccaactg
atcaataaggtgaaggcttctgaggtagaagaggaagtattgctggattttaatcgaatc
aaaaataaagaagtcgtgatcggtggaatcattgcgatggctaatcataggattgcaaag
tccggtaaaccttttggttcatttattatcgaggattattccgattcttatgaaatcatg
gtttttggtgaggattatgtcaagtttaagggttatctggaggaaggatattttgttcag
cttcgtgggttagtgcaggaaagatttaagcaggtaggtaattggggttttgaaattaaa
ggcattcaattgttatcggatttaagggaaaaaatggctaaaatatttacaattaatatt
gcgctacctgcattgaacgatatgttcttagaagagatgaagcaagtattggactcgaat
gagatcgagggtgtagttccgaattgtcaactgcgtttcaaaatttgggatccgcaagat
gaaatttcaatcgaaatgcctgctaaattgaagcgaattaatttgacaaatgagtttcta
gaagcaatagagggatttgagggtgtcaattaccgattgaattaa
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integrated database retrieval system
