Sphingobacterium faecium: MUK51_09930
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Entry
MUK51_09930 CDS
T08637
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
sfae
Sphingobacterium faecium
Pathway
sfae02020
Two-component system
sfae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sfae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MUK51_09930 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MUK51_09930 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfae03021
]
MUK51_09930 (rpoN)
Transcription machinery [BR:
sfae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUK51_09930 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_IclR
MarR
DUF3437
Motif
Other DBs
NCBI-ProteinID:
UXD71593
LinkDB
All DBs
Position
2338413..2339879
Genome browser
AA seq
488 aa
AA seq
DB search
MLKQTLQQKLLQKLSPQQIQFIKLLQVPTVSLDARIKEELEENPALEDGSLANMAEPNEE
YPDRDPDDTFDSEESYDSDEFNVDEYIQEDDYTDYSNNYNYSDEDDDKKEIPIAVQDSFF
EKLQQQLDLLALDDRDFLIGQQIIGSLDDDGYLRRPILSLIDDLAFSQNVIASESEVLEM
LKVIQDFEPAGIGARDLQECLLIQLQKKDQNNPTVIQATKVVKNYLEEFTKKHYDKLEKS
LGLTSEDLKNIVNEILKLNPKPGDSGAVAGKQLHVIPDFHISNNDGVLHLTLNGRNAPEL
RVSRSYQSMFEHYEKSNQKDKKMKEAVQFVKQKLDSAKWFIDAIKQRQQTLLKTMNAIME
YQYDYFLTGDDVKLKPMILKDIADRIGMDISTVSRVANSKYVQTEFGTFLLKSFFSEAIQ
TESGEEVSNKEVKKILEECIANEDKRKPLADEKLTEILKDKGYNIARRTVAKYREALNIP
VARLRKEL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcaaaccttacaacaaaagttattacaaaaactatctccacaacagattcag
tttatcaaacttttacaggttcctacggtatctttggatgcacgcattaaagaagaatta
gaagaaaatccagctcttgaagacggcagcttagcaaatatggctgaaccgaatgaggaa
tacccggatcgtgaccctgacgatactttcgatagtgaagaaagctatgacagcgatgag
tttaatgtagatgaatatattcaggaagatgattataccgattattccaataattataat
tactctgatgaagacgatgataaaaaagagattcctattgctgtacaagattcatttttc
gaaaaattgcaacaacaattagatttattagctttagatgaccgtgattttctaattgga
caacagattatcggaagtttagatgatgacggctatctacgtcgacctatattaagtctt
atcgatgatctagcattctcacagaatgtcatagcgtcagaaagtgaagtattggagatg
cttaaagtgattcaagattttgaacctgctggcattggtgcacgtgatctacaagaatgc
ctactgatacagctgcaaaagaaagatcaaaataatcctacagttattcaagcgaccaaa
gtagttaaaaattatctagaagaatttacaaagaaacattacgataaactggagaaatca
ctaggattaacatccgaagatcttaagaatatcgttaacgaaatacttaaactaaatccc
aaaccaggagattcaggcgctgtagcaggcaaacaactgcatgttatacctgattttcat
atcagtaataatgatggtgttcttcatcttaccttaaatggtcgtaatgctccagaacta
cgtgtaagccgctcataccaaagtatgtttgaacattacgaaaagtctaatcaaaaggat
aaaaaaatgaaggaagcggttcagtttgttaaacaaaaactggattctgctaaatggttt
attgatgccatcaaacaaaggcaacaaactttattgaaaaccatgaatgctatcatggag
tatcaatacgattacttcttaacaggagatgacgtcaaacttaaacccatgattttaaaa
gacattgctgaccgtattggtatggatatttcaacagtttctcgtgtagcaaactcgaag
tatgtacaaacagaatttggaactttccttctcaaatcctttttctctgaagcgatccag
accgaatctggggaagaagtttcgaataaggaagtaaaaaagatcttagaagaatgtatt
gcaaatgaggataaacgtaaacccctagctgacgagaaattaaccgaaattctgaaagat
aaaggttataatatcgctagacgtactgtggcaaaatatcgtgaagcactcaatatacct
gtcgcccgccttcgtaaagagttataa
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integrated database retrieval system
