Sphingobacterium faecium: MUK51_16470
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Entry
MUK51_16470 CDS
T08637
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sfae
Sphingobacterium faecium
Pathway
sfae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUK51_16470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfae03021
]
MUK51_16470
03400 DNA repair and recombination proteins [BR:
sfae03400
]
MUK51_16470
Enzymes [BR:
sfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MUK51_16470
Transcription machinery [BR:
sfae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUK51_16470
DNA repair and recombination proteins [BR:
sfae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUK51_16470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UXD68779
LinkDB
All DBs
Position
complement(3855886..3856878)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQRPDKVIMQKSTDFDGTFEFRPLEPGFGVTIGNALRRILLSSLEGYAITSIRFS
GVSHEFSTIKGVVEDVTEIILNLKQVRFQKTGDQGDSEKIFVVINGQEQFSAGDITKFSN
NFTVLNPDLVICNMDNSVTIEVELSVAKGRGYVNADENKVVDGPVGLIAIDSIFTPIKNV
KFTIENYRVEQKTDYEKLLLDISTDGSIHPEEALKEAAKILIQHFILFSDENMLLESQTK
EETKVVDEEILHMRKILKMELVDLDLSVRALNCLKAADIRSLSELVTYDVADMLKFRNFG
KKSLSEIQELVKSKGLSFGMNLSKYKLDED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttagcatttcaaagaccggataaagttatcatgcaaaaatctacagatttt
gatggtacgttcgaatttcgtccattggagcctggttttggtgtaaccattggtaatgct
ttgcgccgtattttattgtcctcattagaaggatatgcaattacgtcgataaggttttca
ggcgtttcgcacgaattttcaactattaaaggtgtagttgaagacgttactgagattatt
ttgaatttgaaacaagttcgttttcaaaaaacaggtgatcaaggtgatagcgaaaagata
tttgtagtaatcaatggtcaagagcaattctcagctggtgatatcacaaaattctcaaac
aactttacagtattaaaccctgatttggttatctgtaacatggataactcggttacaatt
gaagtagaattgagcgtagctaaaggtcgtggttatgtaaatgctgatgagaataaagtc
gtggatggtcctgtaggattaatcgcgattgattcgatctttactccgattaagaatgtt
aaatttaccattgagaactaccgtgtagaacaaaaaactgactacgagaaattgttgtta
gatatttctactgatggttctattcatccagaagaagctttaaaagaagcagctaaaatc
ttaattcaacactttatcttattttctgatgagaatatgcttcttgagtctcaaactaag
gaagaaactaaagttgttgatgaagaaattttacatatgcgtaaaattttgaaaatggaa
ttagttgacttagatctttcagttcgtgcattgaactgtttgaaagctgctgatattcgt
tcattatctgaattagttacttatgacgtagcagatatgttgaaattcagaaacttcggt
aagaaatcattaagcgaaattcaagaattggttaaatcgaaaggtttatcattcggaatg
aacttgtctaaatataaattagacgaagattaa
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