Sphingobacterium faecium: MUK51_16985
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Entry
MUK51_16985 CDS
T08637
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sfae
Sphingobacterium faecium
Brite
KEGG Orthology (KO) [BR:
sfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfae03009
]
MUK51_16985 (rlmD)
Enzymes [BR:
sfae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MUK51_16985 (rlmD)
Ribosome biogenesis [BR:
sfae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MUK51_16985 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Methyltransf_25
TRAM
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Cons_hypoth95
PrmA
Methyltransf_2
UPF0020
Motif
Other DBs
NCBI-ProteinID:
UXD68878
LinkDB
All DBs
Position
complement(3965742..3967151)
Genome browser
AA seq
469 aa
AA seq
DB search
MRRKSSQERLVFNDIEIIDIAEEGKGVGKTDDLVLFVEKAIPGDVVDVELLRKKKSFGEG
RIQTLKKASEHRVEPFCEHFGVCGGCKWQHMTYDAQLLFKQQSVENALTRIGKVDTSSME
PILASGQTEYYRNKLEYTFSNKKWLTYVDDNVDGMNMDALGFHVPGRFDKILNVNHCYLQ
EDPSNVLRNSVREFAIANDISFYDLRGHSGVLRNLIIRISSTGELMVIVVFAYPEEGQVE
LLMSFIQEKFPSITSLLYIINQKKNDTIFDQEIEIYNGRDFIYEEMEGLKFKVGPKSFYQ
TNSAQAYELYKITRDFAGLSGHELVYDLYTGAGTIANFVAKYAKEVIGVEYVPSAIEDAK
INSEINGVKNTKFYAGDMKDVLTAHFIAQHGKPDVVITDPPRAGMHTDVVARLLEMEAPK
IVYVSCNAATQARDLTLLAEKYDVVRIKPVDMFPHTQHVENVVLLKLKG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaaaagttcacaagaaagattagtattcaacgatatcgagattattgatatt
gcagaagaaggcaagggtgttggtaaaacagatgatttggtattgtttgtagaaaaagca
attccgggtgatgtggttgatgtggagttactgcgtaaaaagaaaagttttggtgaaggt
cgtattcagacattgaagaaagcttctgaacaccgtgttgaacctttctgtgagcatttt
ggagtatgcggtggatgtaaatggcagcatatgacgtatgatgcgcaattattgtttaaa
caacagtctgttgaaaatgcgcttacacgtataggcaaagtggatacttcgtctatggaa
cctatattggcttctggacaaaccgaatattatcgtaacaaattggaatatactttttcc
aataagaaatggttgacttatgttgatgataatgtggatggtatgaatatggatgctctt
gggtttcacgtaccgggcagatttgataagattttaaatgtaaatcattgctacttgcaa
gaagatccttcgaatgtactgcgtaacagtgtgcgtgagtttgcgatcgcaaatgatatt
tctttttatgacctgcgcggacatagtggtgtactgcgtaatttaatcatccgtatttct
tcaacaggagaattaatggtgatcgtggtatttgcttatccagaagaaggacaggtggaa
ctgttaatgtcattcatccaggaaaaatttccgtctataacttctcttctttatattatc
aatcagaaaaagaatgatacgattttcgatcaggaaatagagatctacaacggtcgtgat
tttatttatgaagaaatggaaggccttaagtttaaagttggaccaaaatcattctatcag
acaaattcggcgcaagcttatgaattatataaaataacaagagattttgcaggattgtct
ggtcacgagcttgtttatgatttgtatacaggtgcgggtacgatcgccaactttgttgct
aaatatgcaaaagaagtaattggtgtggaatatgtgccttcagctattgaggatgcaaaa
atcaattcggagatcaatggtgtaaaaaacaccaaattttacgctggcgatatgaaggat
gtgttaacagctcattttatcgcacagcatggtaagcctgatgtggtgatcactgatcct
cctcgtgcgggcatgcatactgatgtggtggcaagattgttagaaatggaggcgccaaaa
atcgtttatgtaagttgtaatgcggcaactcaggcacgtgatttgacattgttggctgag
aaatatgatgtggttcggattaaacctgttgatatgtttccgcatacacagcacgtcgaa
aatgttgttttattaaaactaaagggataa
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