Sulfitobacter faviae: PL335_00440
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Entry
PL335_00440 CDS
T08789
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sfav
Sulfitobacter faviae
Brite
KEGG Orthology (KO) [BR:
sfav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfav03400
]
PL335_00440 (addA)
Enzymes [BR:
sfav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PL335_00440 (addA)
DNA repair and recombination proteins [BR:
sfav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PL335_00440 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WCE66861
LinkDB
All DBs
Position
complement(92704..96075)
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AA seq
1123 aa
AA seq
DB search
MMRDFNDATRAQIEAARPDASTWLTANAGSGKTRVLTDRVARLLLDDVEPQHILCLTYTK
AAASEMQNRLFKRLGEWAMLKDAALRSALADLGVQGELAPEQLRDARTLFARAIETPGGL
KIQTIHSFCAALLRRFPLEAQVSPQFTEIEDRAADLLRAEIVDEMAEGEDAPLVAEIARH
YTGEDFASLTRSIVGQRDAFTTPRSWAEILALFAQPEDLTEDKIAASVFLGSEAAMMAEI
IPHLLAKGGNDGKAGAALQEIDRYDLSALPQLENILLTGSGAKAPFTAKIGSFPTKPTQK
VIAEQMPQLEQLMQRVEDAREARLALKAARKSYVLHRFAARFLERYADEKQKRGWLDFDD
LILKARALLTDKAVAAWVLFRIDGGIDHILVDEAQDTSPRQWDVIERLTDEFYSGAGARN
EVDRTLFVVGDKKQSIYSFQGADPEELDRKGTTFEQKIGEAGQFFQRRSLAYSFRSSSAI
LQAVDGVFDPAIQTGFTNDGHMAFKDRLPGRVDLWPFIEKAGPDEEGDWTDPVDRRSARH
HTVQLAERIARRIKELTTEEHYLPDDSKGGLARRRIQPGDFLILVQRRSALFSEIIRACK
AAELPIAGADRLKVGAELAVRDLAAILSFLATPDDDLSLATALKSPLFGWSEQELFTLAH
YRKEDHLWQALRNQTEAHAATLAVLRDLRGQVDYLRPYDLIERILTRHDGRRKLLARLGP
EAEDGINAMLSQALSYERGTVPSLTGFLQWMQTDDLEIKRQIDSASNQIRVMTVHGAKGL
EAPIVILPDTGRRDVTIKDEIITVDGTPVWKAPADDMPQPMRARLDEMKEAALQERLRLF
YVAMTRAEKWLIVAAAGELSKDESSWYQITAAALARLRAEPLGDDGTLRYQQGDWDALDI
IETPEKTVTTPTLDPVFTRSAPSPKGEDKTLSPSDLGGAKALAGEAGLDMDTALSYGTLV
HELLEHLPLMGPDAREIFLERLARTHPAEMIARAEDEAEAVLNTPALAPLFAETTLAEVP
VTGSLGDQRLHGTIDRLVIAEDRILAVDFKTNRVVPGTAEACPDGLLRQMGAYAHMLRQI
YPDRRIETAILWTATPALMVLPNDIVTNALRALPYLDATAAHS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtgatttcaacgatgccacccgcgcccagatcgaagcggcccggcccgatgcc
tccacttggctgaccgcgaatgcgggctcaggcaagacccgcgtgctgaccgaccgcgtg
gcgcggctgctgctcgacgacgtggagccgcaacacatcctttgcctgacctataccaag
gcggcggcctcggagatgcagaaccgcctcttcaaacgcttgggcgaatgggccatgctg
aaagacgcggcactgcgcagcgccttggccgatcttggcgtgcagggcgaattggcgccc
gagcaactgcgcgatgcccgcaccctttttgcccgcgcgattgaaacgcccggcgggctg
aaaattcagaccatccactctttctgcgcggcccttctgcgccgcttcccgctggaggcg
caggtcagcccgcaattcaccgagatcgaagaccgcgccgccgatctgctgcgggccgag
atcgtcgatgagatggccgaaggcgaagacgccccgctggtcgccgagatcgcgcggcac
tacacgggcgaagatttcgccagccttacccgcagcatcgtgggccaacgcgatgccttc
accacgccccgctcttgggccgagatcctagcgcttttcgcccagcccgaagacctgacc
gaagacaaaatcgcggcttcagtcttccttggcagcgaagcggcgatgatggccgagatc
atcccccatctgctggccaaaggcggcaatgacggcaaggcgggcgcggcgctgcaagag
atcgaccgctatgatctgtccgccctgccccagcttgaaaacatccttctgaccggcagc
ggcgccaaggcgcccttcaccgccaaaatcggcagtttcccgaccaagccgacgcaaaag
gtcattgccgaacagatgccgcagcttgagcaattgatgcagcgcgtcgaagacgcccgc
gaagcgcggctggcgctgaaggcggcgcgcaaatcctatgtgctccaccgtttcgcggcc
cgctttcttgaacgctacgcggatgagaaacaaaaacgcggctggctcgactttgacgat
ctgatcctcaaagcccgcgccttgctgaccgacaaggccgtggccgcttgggtgttgttc
cgcatcgacggcggcatcgaccatatccttgtcgacgaggcgcaggacacctcgccccgg
caatgggacgtgatcgaacggctgacagatgaattttactccggcgccggggcgcgtaac
gaggtcgatcgcacgctcttcgtcgtgggcgataagaagcagtcgatctactctttccaa
ggcgcggaccccgaagagctggaccgcaaaggcacgacattcgaacagaagatcggtgag
gcgggccagtttttccagcgccgcagtcttgcctattccttccgctcctcttcggcgatt
ttgcaagcggtcgatggggttttcgaccccgcgatccagaccggctttaccaatgacggc
catatggccttcaaagatcgcctgcccggccgcgtcgatctttggcctttcatcgaaaag
gctggccctgacgaggagggcgattggaccgatcccgtcgaccgccgcagcgcgcggcat
cacacggtgcaactggccgaacgcatcgcacggcgcatcaaggagttgacgaccgaggaa
cattacctccccgatgacagcaagggcggcttggcccggcggcgcatccaaccgggggat
tttctgatcctcgtgcagcgccgctcggccctgttttccgagatcatccgcgcctgcaag
gcggcggaactgcccatcgccggggccgacaggctcaaggttggggccgaactggcggtg
cgcgatctggcggcgatcctgtcgttcctcgccacgccggacgacgatctatcgcttgcc
accgcgctgaaatcgccacttttcggctggtcggaacaagagcttttcaccctcgcccat
taccgtaaggaggatcacctctggcaagcgctgcgcaaccagaccgaggcccacgccgcc
accctcgccgtgctgcgcgacctgcgcgggcaggtcgattacctgcgcccctacgatctg
atcgaacgcattctcacccgccacgatgggcgccgcaaactgctcgcgcggctggggcca
gaggccgaggatgggatcaacgcgatgttgagccaagcgctgtcttacgagcgcggcacg
gtgcccagcctgaccgggttcctgcaatggatgcagaccgatgatctggaaatcaaacgt
cagatcgacagcgcgtcgaaccagatccgggtgatgacggtgcatggtgccaagggtctg
gaagcgccaatcgtgatcctgcccgacaccgggcggcgcgatgtgacgatcaaggatgag
atcatcaccgttgacggcacccccgtctggaaagccccggcagatgatatgccccagccc
atgcgcgcgcggctagacgagatgaaagaggccgcgctgcaagagcggcttcgcctgttc
tatgtcgccatgacgcgggccgagaaatggctgatcgtggccgcggcaggggaattgtcg
aaagatgaatcctcttggtatcagatcaccgcagccgctctggccaggctccgggccgag
cctttgggcgacgatggcacgctgcgctatcaacagggcgattgggatgcgctcgacatc
atagagacgcctgagaaaaccgtaacaacgcccacgttagaccctgttttcacccgctcc
gccccctcccccaagggggaggacaagaccctgtcgccctcggatctcggcggagccaag
gcgctcgcgggtgaggccgggctcgatatggacaccgcgttgagctatggcacgctggtc
catgaactgctggaacatctgccactgatggggccggatgcacgggagatctttctggag
cggttggcccgcacacaccccgccgagatgatcgcccgcgcggaagatgaggcggaagcg
gtgctgaacacccctgccctcgccccgctgttcgctgagacaaccctcgccgaagtgccc
gtgaccggcagcctcggagaccagcgcctgcatggcacgatcgaccgtttggtgatcgcc
gaggatcgcatccttgctgtcgatttcaagaccaaccgcgtggtccccggcacggctgag
gcctgccccgacgggctgctgcgccagatgggggcctatgcccatatgctgcgccagatc
tacccggatcggcggatcgagacggccattctatggactgccacccccgcgcttatggtg
ttacccaacgatatcgtgacaaatgccctgcgtgccctgccatatcttgacgccactgcc
gcgcattcatag
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