Sulfitobacter faviae: PL335_01975
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Entry
PL335_01975 CDS
T08789
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sfav
Sulfitobacter faviae
Brite
KEGG Orthology (KO) [BR:
sfav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfav03016
]
PL335_01975 (truB)
Enzymes [BR:
sfav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PL335_01975 (truB)
Transfer RNA biogenesis [BR:
sfav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PL335_01975 (truB)
Prokaryotic type
PL335_01975 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WCE67148
LinkDB
All DBs
Position
complement(399393..400319)
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AA seq
308 aa
AA seq
DB search
MARKRKGRDISGWLVVDKPAGPTSTAVVNKVRWALEAKKAGHAGTLDPEATGVLAIALGE
ATKTVPYITDALKAYEFTVRLGIATNTDDAEGEAIGTSDLRPDDAAIKDALNGFIGDIQQ
VPPQFSAVKIDGQRAYKRARDGEEMEIAARPLWVESLLLVDRPDADHVTLEMVCGKGGYV
RSIARDLGQKLGCLGHVRELRRTWSGPFEAGNALTLAQVDELARTPELDTYLLPLAEGLA
DLPEVKATPEGATRLRNGNPGMVIAHDVEYGDECWASLDGQPVAVGRFKAGELHPSRVFN
LSSDANEG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaagggtcgcgatatttctggttggctggtggtggacaaacccgct
ggccccacctcgaccgccgtggtcaacaaggtccgttgggcgctggaggccaagaaggcg
ggccacgcaggcacgctcgaccccgaagcgaccggcgttctggccatcgccttgggcgaa
gcgaccaagaccgtgccctatatcaccgacgcgctcaaagcctatgagttcaccgtacgt
ttggggatcgccaccaataccgacgacgccgaaggcgaagccatcggcacctctgacctg
cgccccgatgacgccgcgatcaaggatgcgctgaacggctttatcggtgacattcagcag
gtgccgccgcagttctccgccgtgaagatcgacggccaacgcgcctataaacgcgcccgc
gacggcgaagagatggagatcgccgcccgccccctatgggtggaaagcctgctgctggtc
gaccgccccgatgccgatcatgtcacgcttgaaatggtctgcggcaagggcggctatgtc
cgctccatcgcgcgcgatctggggcagaagcttggctgtctcggccacgtccgcgaattg
cgccgcacatggtccggcccgttcgaggcaggcaacgccctgacgctggcgcaggtggac
gaactggcccggacaccggaactcgacacctatctgttgccgctggccgaagggctcgcc
gacctgcccgaggtcaaagccacccccgaaggcgccacccgcctgcgcaacggcaacccc
ggcatggtcatcgcccatgacgtggaatatggcgatgaatgctgggcctcgctcgacggg
cagcctgtcgccgtgggccgcttcaaggcgggggagctgcacccgagccgggtgttcaac
ctgtcgtcggacgcgaatgagggctga
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