Sulfitobacter faviae: PL335_05240
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Entry
PL335_05240 CDS
T08789
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfav
Sulfitobacter faviae
Pathway
sfav03420
Nucleotide excision repair
sfav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PL335_05240
03430 Mismatch repair
PL335_05240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfav03400
]
PL335_05240
Enzymes [BR:
sfav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PL335_05240
DNA repair and recombination proteins [BR:
sfav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PL335_05240
MMR (mismatch excision repair)
Other MMR factors
PL335_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WCE67748
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All DBs
Position
1073950..1076367
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AA seq
805 aa
AA seq
DB search
MSDFDEMDAFEGASLSARAMAARPQPYLEGLNPAQRAAVETLDGPVLMLAGAGTGKTRAL
TARIVHLLNTGRARPHEVLAVTFTNKAAREMKTRVGQMLGKQVEGMPWLGTFHAICVKLL
RRHAELVGLKSNFTILDTDDQLRLLKQLVAAEGIDDKRWPARMLAGIIDGWKNRALTPDK
IPSADAGAYNHRGPEIYAKYQRRLIELNATDFGDLLLHMVTIFQAHPDVLAQYQRWFKYI
LVDEYQDTNVAQYLWLRLLAQGHKNICCVGDDDQSIYGWRGAEVGNILRFETDFPGAHVV
KLEQNYRSTPHILAAASGVIAGNEGRLGKTLWTEETEGEKVRLIGHWDGEEEARWIGDEI
ESAQRGTRGLDPFSLDDMAILVRASHQMRAFEDRFLTIGLPYKVIGGPRFYERLEIRDAM
AYFRVVTSPDDDLAFERIVNTPKRGLGEKAQQKIQRTARDHGVNLVEGARILLAHGGISG
KGAAQLRLLIDGIDRWSSMLQGPRIEISEDDSVLDDGAAPLRVDYGPPEVSHVELAEMIL
DESGYTGMWQNDKTPEAPGRLENLKELVKALEGFENLQGFLEHVSLIMDNEQEGDGEKVS
IMTLHAAKGLEFPMVFLPGWEDGLFPSQRSMDESGMKGLEEERRLAYVGITRAERICTIS
FAANRRVFGQWQNAMPSRFIDELPEEHVDVLTPPGLYGGGFGAAMPQSDLHDRAASANVY
NSPGWKRLQSRSGARGTSQPRESRNVTIDMQAVAAFEMGERVFHDKFGYGEVIGIEGDKM
EVAFEKAGTKKVVSRFLTGGKDVPF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttgacgaaatggacgcctttgagggcgcctccctgtccgcccgcgccatg
gccgcgcgtccgcagccttatctggaggggttgaaccccgcccaacgggccgcggtcgag
acgttggatggccccgtgctgatgctcgccggggcgggcaccggcaaaacgcgggcgttg
acggcgcgaatcgtgcatctgcttaacaccgggcgcgcgcgcccgcatgaggttctggcg
gtcaccttcaccaataaggccgcgcgcgagatgaagacccgcgtgggccagatgctgggc
aagcaggtcgaggggatgccatggctcggcacctttcacgcgatctgcgtcaagctgctg
cggcggcatgcggaattggtggggctgaaaagtaatttcacgattctcgatacggatgac
cagttgcgcctgctcaaacaattggtcgccgccgaagggatcgacgacaagcgctggccc
gcgcggatgctggcggggatcattgacggctggaaaaaccgcgcgctgaccccggacaaa
atcccgagcgcggatgccggggcatacaatcaccgcgggccggaaatttacgcgaaatat
caacgccgtctgatcgaattgaacgcgaccgatttcggcgatttgctgctccatatggtg
acgattttccaggcgcacccggatgtgttggcgcagtatcagcgttggttcaaatacatc
ctcgtcgacgaatatcaggataccaacgtggcccaatatctgtggctgcggcttttggcg
caggggcacaagaatatctgctgcgtgggcgacgacgaccagtcgatctatggctggcgc
ggggccgaagtgggcaacatcctgcggtttgaaacggatttccccggcgcccatgtggtc
aagcttgagcagaattaccgctccaccccgcatatcctcgccgccgcctcgggcgtgatc
gcgggcaatgaggggcgcttgggcaagactctttggaccgaagagaccgagggcgaaaag
gtccgcctgatcggccattgggatggcgaggaagaggcccgttggatcggggatgagatc
gaatccgcgcagcgcggcacgagggggctcgaccccttctcgcttgacgatatggcgatt
ctcgtccgggcgagccaccagatgcgcgcttttgaggaccggtttttgaccattggcctg
ccttataaggtgattggcggcccgcgattctatgagcgtttggaaatccgcgacgccatg
gcctatttccgcgtggtcaccagccccgatgatgatctggctttcgagcggattgtgaac
acgcccaagcggggtttgggcgaaaaggcgcagcagaaaatccagcgcacggcgcgggat
catggggtgaaccttgtcgaaggcgcacgaatccttctcgcccatggcgggatcagcggc
aaaggggcggcgcaactacggcttttgatcgacgggatcgaccgttggtcatccatgctg
caaggcccgcggatcgagatcagcgaagacgactcggtgctcgatgatggtgccgcgccg
ctgcgggtggattatggcccgcctgaagtgtctcatgtcgaattggccgagatgattctc
gacgaaagcggctataccggcatgtggcagaatgacaaaacgcccgaagcgccggggcgg
ctggaaaaccttaaggaactcgtcaaagccttggaaggcttcgagaacctgcaaggcttc
ctcgaacatgtcagcctgatcatggataatgagcaggagggcgatggcgagaaggtctcg
atcatgacgttgcacgcggccaagggtttggaattccccatggttttcctgccaggctgg
gaagatgggctgttcccctcgcagcgttcgatggatgaaagcgggatgaaggggctcgaa
gaggagcggcggctggcctatgtcggcatcacccgggcggagcggatttgcaccatctct
ttcgccgccaatcgccgggtctttggccaatggcagaatgcgatgccgtcgcgtttcatt
gatgagctgcccgaagaacatgtggatgtgctgaccccgccggggctttacggcggtggt
tttggcgcggctatgccgcaatcggacctacatgaccgtgccgcaagcgcgaatgtctat
aattcaccgggctggaaacgcctgcaatcacgcagcggggcgcggggcaccagccagccg
cgcgaaagccgcaatgtgacgatcgacatgcaagctgtcgccgcctttgagatgggtgag
cgcgtttttcacgataaattcggctatggcgaagtgatcggcatcgaaggcgacaagatg
gaagtcgctttcgaaaaagccgggacgaagaaggtcgtctcgcggttcttgaccggcggg
aaagacgtaccgttctaa
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