Sulfitobacter faviae: PL335_08365
Help
Entry
PL335_08365 CDS
T08789
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sfav
Sulfitobacter faviae
Pathway
sfav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PL335_08365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfav03019
]
PL335_08365
Enzymes [BR:
sfav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PL335_08365
Messenger RNA biogenesis [BR:
sfav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PL335_08365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HEM4
AAA_19
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
WCE65421
LinkDB
All DBs
Position
complement(1687561..1688871)
Genome browser
AA seq
436 aa
AA seq
DB search
MSDFDMMGLPAKLVARLKGMGLNEPTPIQKQAIPHALNGRDVMGLAQTGTGKTAAFGVPL
LAQMMEIEGRPAARSVRGLVLAPTRELAQQIAVNLRGYAEGTPIKVAMVVGGQSINTQIK
RLERGVDLLIATPGRLLDLLDRRAVKLDATTFLVLDEADQMLDMGFIHDLRKISNMIPKE
RQTMLFSATMPKLMNEIANSYLNSPIRIEVSPPGKAADKVTQEVHFIAKAEKTELLKELL
AKHKGERALVFGRTKHGSEKLMKTLVKAGFDAASIHGNKSQGQRDRAIAGFKNGDITVLV
ATDVAARGLDIPDVKHVYNFDLPNVPDNYVHRIGRTARAGKDGAAVAFCAPDEMGELKAI
QKTMGISIPVASGRPWEVIDEPAKPKGRGRRRGGRPGGGGGRPGGGGGGGEGAGKPSGGR
RRRRGGGGKPGGQQAA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttgacatgatgggcctgcctgccaaactggtggcccgactgaaagggatg
gggctgaacgagccgaccccgatccagaaacaggcgatcccccatgcgctgaacgggcgc
gacgtgatgggccttgcccagaccggcaccggcaagaccgccgcctttggcgtgccgctg
ctggcccagatgatggagatcgagggccgccccgcagcgcgttccgtgcgcgggctggtg
cttgcgcctacgcgtgagctggcgcagcagatcgccgtgaacctgcgcggctatgccgaa
ggcacgccgatcaaagtggcgatggttgtgggtggtcagtcgatcaacacgcagatcaaa
cgtctggaacggggcgtcgatctgctgattgccacaccgggccgtctgctggacttgctc
gaccgccgcgcggtcaagctcgacgcaacgacctttctcgtgctggatgaggccgaccag
atgctcgacatggggttcatccatgatctgcgcaaaatctcgaacatgatcccgaaagag
cggcagacgatgctcttctcggcgaccatgcccaagctgatgaacgagatcgccaacagc
tatctcaacagcccgatccgtatcgaagtctcgcctccgggcaaggcggcggataaggtg
acgcaagaggtgcatttcatcgccaaggccgagaagaccgaactgctgaaagaactgctg
gccaagcacaagggcgaacgcgcgctggtttttggccgcacgaaacacggctcggaaaag
ctgatgaagacgctggtcaaggccgggtttgacgcggcttcgatccatggcaacaaaagc
caaggtcagcgggaccgcgcgattgcagggttcaagaatggcgacatcaccgtgctggtg
gccaccgatgtggcagcgcggggtttggacattccggatgtgaaacatgtctataacttc
gacctgccgaatgtgccggacaactacgtccaccgcattggccggaccgcgcgggcgggc
aaggatggggccgccgtggccttctgcgcgcccgatgagatgggcgaactgaaggcgatc
caaaagacgatgggtatttcgatccccgtggcctcgggccgtccttgggaagtgatcgat
gagccagcgaaacccaaaggccggggccgcagacgcggtggccgccccggtggtggtggc
ggtcgtcccggtggcggcggcggcggtggtgaaggcgcgggcaagccaagcggcgggcgg
cgtcgcaggcgtggcggcggcggcaagccgggcggccagcaggcggcctga
DBGET
integrated database retrieval system
