Sulfitobacter faviae: PL335_15055
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Entry
PL335_15055 CDS
T08789
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sfav
Sulfitobacter faviae
Pathway
sfav03030
DNA replication
sfav03410
Base excision repair
sfav03420
Nucleotide excision repair
sfav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PL335_15055 (polA)
03410 Base excision repair
PL335_15055 (polA)
03420 Nucleotide excision repair
PL335_15055 (polA)
03440 Homologous recombination
PL335_15055 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfav03032
]
PL335_15055 (polA)
03400 DNA repair and recombination proteins [BR:
sfav03400
]
PL335_15055 (polA)
Enzymes [BR:
sfav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PL335_15055 (polA)
DNA replication proteins [BR:
sfav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PL335_15055 (polA)
DNA repair and recombination proteins [BR:
sfav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PL335_15055 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PL335_15055 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
WCE66671
LinkDB
All DBs
Position
3032636..3035434
Genome browser
AA seq
932 aa
AA seq
DB search
MTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGPNAP
THVAVIFDKGSHTFRNDMYDQYKANRDAMPEDLRPQIPLTRTATEAFNIACKELEGYEAD
DIIATLAVQARAAGGRCTIISSDKDLMQLVGDGVEMLDAMKNKTIDRDGVFEKFGVYPER
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDALLERAGEIKQPKRRQTLIDHAE
QIRLSRNLVLLDENTPLDFTIDDLEVRDPDADRLLGFLSEMEFRTLSKRVAEVLGREAPV
IPEAPAPAVADAPQVAEVAFDHSQYEQVSDAEALRVWLNRIYERGYVAVDTETTGLNEMT
AELVGVSLAVEPGQACYIPLTHKASRDDDLFGGEGLAPGQMPVEEALQLLTPMLEDPAIL
KIGQNMKYDSKIFAQLGIAVAPIDDTMLMSYAMHAGLHGHGMDTLSERYLGHTPMPIKPL
LGSGKSAVTFDKVPLADAVPYAAEDADVTLRLWQLFKPQLHRAEVTKVYETLERPLVPVL
AQMERAGIEVDRDTLSRMSNAFAQKMAGLEADIHELAGESFNVGSPAQLGEILFGKMGLP
GGKKGKTGKYSTGADVLEDLATEHDLARRVLDWRQLSKLKSTYTDALQDHVNAETGRVHT
CYSIAGAATGRLASTDPNLQNIPIRSEEGRRIREAFVAPEGKVLVALDYSQIELRILAHI
AQIDALKEAFHRGDDIHAMTASEMFDVPMDQMTPEIRRNAKAINFGVIYGISGFGLARNL
RIPRAEAQGFIDRYFERFPGIRTYMDETKAFAKERGYVQTLFGRKINTPNIGAKGPQAGF
AARAAINAPIQGTAADVIRRAMVRMPEAIADLPATMLLQVHDELLFEVEKGAEDALIAAA
REVMENANDPVVKLDVKLIVDAGVGANWAEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgacattcggcaaaggccaccacctgcatctgatcgacggctctgccttcatctttcgc
gcctatcacgccctgccgccgctgacgcgcaaatccgatggcttgccgattggcgccgtg
gcgggcttctgcaacatgctgcaccgctatgtcgagggcaacaccggccccaacgcgcct
acccatgtcgccgtgatcttcgacaagggcagccacaccttccgcaatgacatgtacgac
cagtacaaggccaaccgcgacgcgatgcccgaagacctgcgcccgcagatcccgctgacc
cgcacggcgaccgaagccttcaacatcgcctgcaaagagcttgagggctatgaggccgat
gacatcatcgcgaccctcgccgtgcaggcccgcgccgccggggggcgttgcaccatcatc
agctccgacaaggacctgatgcagcttgtgggcgacggggtggaaatgctcgacgcgatg
aagaacaagaccatcgaccgcgatggggtgttcgagaagttcggcgtctatcccgaacgc
gtggtcgacgtgcaagcgctggcgggcgattcggtcgacaacgtgcccggcgcgcccggc
atcgggattaagacggcagcgcttttgatcaatgaatacggcgatctggatgcgctgctt
gaacgggcgggcgagatcaaacagcccaagcgccgccagaccctgatcgaccatgccgag
caaatccgcctgagccgcaacctcgtcctgctggacgagaacacgccgctcgacttcacc
atcgacgatctcgaagtgcgcgaccccgatgcggaccgcctgctgggtttcctgtccgag
atggagttccgcaccctgtcgaaacgcgtggccgaggtgttgggccgcgaggcccccgtc
atccccgaagcgcccgcccccgccgtggccgatgcgccgcaggtggccgaggtggccttt
gaccacagccagtatgaacaggtcagcgacgccgaagcgctgcgtgtctggctcaatcgg
atttacgagcggggctatgtcgcggtggacaccgagaccaccggcctcaatgagatgacc
gcggaactggtcggcgtttcgctggccgtagagcccgggcaggcctgctacatcccgctg
acccacaaagccagccgcgacgacgacctcttcggcggagaggggctagcccccggtcag
atgccggtcgaagaggcgctgcaactgctgaccccgatgctggaggatcccgcgatcctc
aagatcgggcagaacatgaaatacgacagcaagattttcgcccaactgggcatcgcggtc
gcgcccatcgacgacaccatgctgatgtcctacgcgatgcacgcgggcctgcacgggcat
gggatggacacgctgtcggaacgctacctcggtcacacaccgatgccgatcaagccactc
ttgggcagcggcaaatccgccgtgaccttcgacaaggtgccgctggccgatgccgtcccc
tatgccgccgaagatgccgatgtcaccctgcgcctgtggcagcttttcaagccacaactg
caccgcgccgaggtcaccaaggtctacgaaacgctagagcgcccgctggtgccggtcttg
gcgcagatggagcgggcgggcatcgaggtcgatcgcgatacgctcagccgcatgtccaac
gcctttgcccagaaaatggccgggctggaggcggatattcacgagttggcgggcgagagt
ttcaacgtcggctcccccgcccagcttggtgaaatcctctttggcaaaatggggctgccg
ggcggcaaaaagggcaagaccgggaaatactccaccggcgcggatgtgctggaggatttg
gcgaccgaacatgacctcgcccgccgggtgctggactggcggcagctgtccaagctgaaa
tcgacctataccgatgcgctgcaagaccatgtgaacgccgagacgggccgcgtgcacacc
tgctattccatcgccggggcggcgacggggcggctcgcctcgaccgatccgaacttgcag
aacatcccgatccgttccgaggaaggccgccgcatccgcgaggctttcgtcgcccccgag
ggcaaggtgctggtggcgctggattacagccagatcgagctgcggattctggcgcatatc
gcccagatcgacgcgctgaaggaggcgtttcaccgcggcgacgacatccacgccatgacc
gcgtccgagatgttcgacgtgccgatggatcagatgacacctgagattcgccgcaacgcc
aaggcgatcaacttcggcgtgatctacggcatctcgggcttcggccttgcgcgcaacctg
cgcatcccgcgggccgaggcgcagggtttcatcgaccgctatttcgagcgtttccccggc
atccggacctacatggacgagaccaaggcctttgcgaaagagcgcggctatgtgcagacg
ctctttggccgcaaaatcaacacgcccaacatcggcgccaagggaccgcaggcgggcttc
gccgcccgggccgcgatcaacgcgccgatccaaggcaccgccgccgacgtgatccgccgc
gccatggtgcggatgcccgaggcgatcgccgatctgcccgcgaccatgctgttgcaggtg
cacgatgaactgctgttcgaggtcgaaaagggtgccgaagatgcgctgatcgccgccgcg
cgtgaggtgatggagaatgccaatgatccggtggtgaagcttgacgtgaagctgatcgtc
gacgccggtgtgggtgccaattgggcggaggcgcattga
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