Sulfitobacter faviae: PL335_16175
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Entry
PL335_16175 CDS
T08789
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfav
Sulfitobacter faviae
Brite
KEGG Orthology (KO) [BR:
sfav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfav03032
]
PL335_16175
03400 DNA repair and recombination proteins [BR:
sfav03400
]
PL335_16175
Enzymes [BR:
sfav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PL335_16175
DNA replication proteins [BR:
sfav03032
]
Prokaryotic type
DNA Topoisomerases
PL335_16175
DNA repair and recombination proteins [BR:
sfav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PL335_16175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WCE68361
LinkDB
All DBs
Position
unnamed1:complement(125521..126495)
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AA seq
324 aa
AA seq
DB search
MTAPSTLRYYPDSKPGIARRRCGRGFSYHAPDGRCIKDKAERARLVKLAVPPAYERVWIS
PYDNGHLQATGFDARGRKQYRYHPLWSEAQAQEKYASLPEFAETLPRIRRRVRRDLKEEL
GERDFALAAAVAMIDRLSLRVGNQVYAETNRTYGTLTLKRRHLVLRDGKLQASFMAKGGK
RVRRQIANRTLMRALEKIRDLPGADLLTWLDEEGQPRSLTSTALNDYIAEAAGTEGFSAK
TFRTWAGSVAAFDVALKEDKPSIKAMAEAAAERLHNTPTIARNSYIHPEVIELCQTPQDL
PDPPDIDDMTQAERGLLAFLRAKT
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaccgtcgacgctcaggtactaccccgacagcaagcccggcatcgctcggcgg
cgctgcgggcgggggttttcctatcacgcgcccgatggccgctgcatcaaggacaaggcc
gagcgggcgcggctggtgaaactggcggtgcccccggcctatgagcgggtctggatcagc
ccctatgacaacggtcaccttcaggcgacggggttcgatgcacgggggcgcaagcaatac
cgttaccatccgctctggtccgaggcgcaggcgcaggagaaatacgcaagcctgcccgag
tttgccgagaccctgccgcgcatccgccgccgcgtgcgccgtgatctcaaggaggagttg
ggcgaacgtgattttgcgctggccgccgccgtggcgatgatcgaccggctgtcgctgcgc
gtcggcaatcaggtctatgccgaaaccaaccgcacctatggcacgctgaccctgaaacgg
cggcatctggtcctgcgcgacggcaagttgcaggcgtccttcatggcgaagggcggcaaa
cgggttcgccgccagattgccaaccgcaccctaatgcgcgcgcttgagaaaattcgcgac
ctgcccggcgcggacctgctgacatggctcgacgaagaggggcagccgcgcagtctgacc
tcaaccgcgctgaacgattacatcgccgaggccgctggcaccgaaggcttctcggccaag
acctttcgcacttgggccgggtccgtcgccgccttcgacgttgcgctgaaagaggacaag
cccagcatcaaagccatggccgaagccgccgccgaacggttgcacaatacgcccaccatc
gcgcgcaacagctatatccatccggaggtgatcgaactttgccagaccccgcaagacttg
ccggacccgcccgatatcgacgatatgacccaagccgaacgggggctgctggcctttctg
cgcgcgaagacgtga
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integrated database retrieval system
