Streptomyces fradiae: CP974_00255
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Entry
CP974_00255 CDS
T07648
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfb
Streptomyces fradiae
Pathway
sfb00040
Pentose and glucuronate interconversions
sfb01100
Metabolic pathways
sfb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CP974_00255
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CP974_00255
Enzymes [BR:
sfb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CP974_00255
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QEV10710
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Position
complement(56496..58058)
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AA seq
520 aa
AA seq
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MRRPAALRLSAALATMALAATAGVTLSTSEASAATGSATGYATQNGGTTGGAGGQTVRAT
TGTAIHAALCNRPADNTPITIQVEGTINHGNTAKVSGTSCNTAAGVIELKQISNVTIVGV
GSGAVFDQLGIHIRESSNIIIQNVTVRNVKKSGSPTSNGGDAIGMEKNVRNVWVDHVTLE
ASGGEAQGYDGLFDMKDDTRYVTLSYSVLRNSGRGGLVGSSESDLANSFITYHHNRYENI
DSRAPLLRGGTAHMYNNHYVRLHSSGINSRAGAKARVDSNYFEDSKDVLGTFYTSAAGYW
QVSGNVFDNVTWSSPGDENNPAGPDPRSNTTVGIPYAYSLDRADCVPEIVSRTAGAGKGL
LVSDGACSPQSPAPTSSAPAPSEPAPSPTVPTPGPTQPTGRNLSIGAGSDGSGKAEGTSY
GDVRDGDMGTYWSPDGPTGAISIKWASPTAVSLVNIREASGFGGSVDGWRLVDGDTGTVL
ASGQGAGLVAFPRTTLRKITFEITSSRGTVRVAEYETYAG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccagccgcactgcggctctccgcggcgttggccaccatggccctcgcggcc
acggccggcgtgacgctgtcgacgtcagaggcgtcggcggcgaccgggagcgccaccggc
tacgcgacccagaacggcgggaccaccggcggagcgggcgggcagacggtgcgggccacc
acgggaaccgcgatccacgcggccctgtgcaaccggcccgccgacaacaccccgatcacc
atccaggtcgagggcaccatcaaccacggcaacaccgccaaggtgtcgggcaccagctgc
aacaccgcggccggcgtcatcgaactcaagcagatcagcaacgtcacgatcgtcggagtc
ggcagcggagccgtcttcgaccagctgggcatccacatccgcgagtccagcaacatcatc
atccagaacgtgaccgtccggaacgtcaagaagtccggatcccccacgtccaacggcggt
gacgccatcggcatggagaagaacgtccgcaacgtctgggtcgaccacgtcacgctggag
gcctccggcggggaggcgcagggttacgacggcctgttcgacatgaaggacgacacccgc
tacgtgaccctctcctacagcgtcctgcgcaactccggtcgcggcggcctcgtcggctcc
agcgagagcgacctcgcgaacagcttcatcacgtaccaccacaaccggtacgagaacatc
gactcccgtgcgcccctgctccggggcgggacggcccacatgtacaacaaccactacgtg
cgcctccactcctccggcatcaactcccgtgcgggagccaaggcgagggtggacagcaac
tacttcgaggactccaaggacgtcctcggcacgttctacacgtccgccgccggctactgg
caggtgagcgggaacgtgttcgacaacgtgacgtggtccagccccggtgacgagaacaac
ccggcggggccggacccgcgctccaacaccacggtcggcatcccctacgcgtacagcttg
gaccgggcggactgcgtaccggagatcgtgagccggacggcgggtgcgggcaaggggctc
ctggtgtcggacggggcgtgctcgccgcagagccccgcacccacgtccagcgcgcccgcc
ccgagtgagcccgccccctctcccaccgttcccacgccggggccgacgcagccgaccggc
aggaacctcagcatcggagccggctccgacgggtccggcaaggccgagggaacgagctac
ggcgacgtgcgcgacggcgacatgggcacgtactggtcgccggacggcccgaccggcgcc
atctccatcaagtgggcgtccccgaccgcggtctccctggtcaacatccgggaggcgtcc
ggcttcggcggctctgtcgacggctggcggctggtcgacggtgacacgggaacggtcctg
gcgtccggacagggtgcgggactggtcgccttcccccgtaccactctgcggaagatcacc
ttcgagatcacgagttcgcggggcaccgtgcgggtcgccgagtacgagacctacgccggc
tga
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