Streptomyces fradiae: CP974_00360
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Entry
CP974_00360 CDS
T07648
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sfb
Streptomyces fradiae
Brite
KEGG Orthology (KO) [BR:
sfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfb03021
]
CP974_00360
Transcription machinery [BR:
sfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP974_00360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_Crp_2
HTH_37
HTH_Tnp_4
HTH_31
HTH_AraC
GerE
DUF1492
Motif
Other DBs
NCBI-ProteinID:
QEV10727
LinkDB
All DBs
Position
81383..82234
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AA seq
283 aa
AA seq
DB search
MTVATTDTRTGAKSGIAMLPEVEDPRNVPPKDARALTKLFLEQLAVLEEGTHEYQYARNT
LIEMNMSLVRYAAGRFRSRGDEMDDIVQVGMIGLIKAIDRFELSREVEFTTFAVPYIVGE
IKRFFRDTSWAVHVPRRLQEARVELARATEELRSRLGRTPTVRELSELMNLSEDEVIEAR
LASNGYNSSSLDAAIGGDETGETALADFIGAEDPAMELVEDFQSLAPLISRLDERDRLIL
HLRFVEELTQAQIGEQLGCSQMHVSRLLSRTLKRLREGMLTTR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggcgacgaccgacacgaggaccggggccaagagcggtatcgccatgttgccg
gaggtggaggacccccggaacgtcccgccgaaggacgctcgggcgctgaccaagctgttc
ctggagcagctcgcggtgctcgaggagggcacccacgagtaccagtacgcccgcaacacg
ctcatcgagatgaacatgtccctcgtgcggtacgcggcgggccggttccgcagccgcggc
gacgagatggacgacatcgtccaggtgggcatgatcggcctgatcaaggccatcgaccgg
ttcgagctgagccgcgaggtcgagttcacgacgttcgccgtgccgtacatcgtcggcgag
atcaagcggttcttccgcgacacctcgtgggccgtgcacgtgccgcgccgcctccaggag
gcgcgcgtcgagctggcgcgggcgaccgaggagctgcgcagccggctggggcgcacgccg
accgtacgggagctgtcggagctgatgaacctctccgaggacgaggtcatcgaggcccgg
ctcgcgtcgaacggctacaactcgtcgtccctcgacgccgcaatcggcggcgacgagacc
ggggagaccgctctcgcggacttcatcggcgccgaggacccggcgatggagctggtggag
gacttccagtccctcgccccgctgatcagccggctggacgagcgggaccggctgatcctg
cacctgcggttcgtcgaggagctcacccaggcgcagatcggcgaacagctcggctgctcc
cagatgcacgtgtcgcggctgctgtcgcgcaccctgaagcgcctgcgtgagggcatgctc
accacccgctga
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