Streptomyces fradiae: CP974_05520
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Entry
CP974_05520 CDS
T07648
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sfb
Streptomyces fradiae
Pathway
sfb03030
DNA replication
sfb03430
Mismatch repair
sfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP974_05520
03430 Mismatch repair
CP974_05520
03440 Homologous recombination
CP974_05520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfb03032
]
CP974_05520
03400 DNA repair and recombination proteins [BR:
sfb03400
]
CP974_05520
Enzymes [BR:
sfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP974_05520
DNA replication proteins [BR:
sfb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP974_05520
DNA repair and recombination proteins [BR:
sfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP974_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DEDDh_C
RNase_H_2
PTCB-BRCT
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QEV11558
LinkDB
All DBs
Position
1270251..1271231
Genome browser
AA seq
326 aa
AA seq
DB search
MTMLDDRTTAAAWPPAYPQGYAVVDVETTGLSAHDRIVSAAVYRLDARGRVEDHWYTLVN
PERDPGPVSIHGLTSEVLEGAPLFPEVAAEFAERLDGRVLVAHNAYFDWSMIAREYARAR
GTAPVRQRLCTMALARELALPLPNMKLESLAAHFGVRQRQAHNALDDARVLAEAFRPSLH
AAAKRGVRLPLLECRPLTEWSAAPGGGASRIGRQAGARSGGWRPSRRRPACPYPNPGRYE
PDKPLKQGMRVAFSGDTSVERELLEDRAVEAGLHVATSVSRLTSLLVSNDPDAVTSKVAK
AKAFGTPVVDEVAFTHLLRDVAPADG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctcgacgaccgtacgacagcagcagcgtggccgcccgcctacccgcagggg
tacgcggtcgtcgatgtggagaccaccgggctctccgcgcacgaccggatagtctccgcc
gccgtgtaccggctggacgcccggggccgggtggaggaccactggtacacgctggtcaac
ccggagcgcgaccccggaccggtgtcgatccacggactgaccagcgaggtgctggagggg
gcgcccctcttccccgaggtggccgccgagttcgccgagcggctcgacgggcgcgtgctc
gtggcgcacaacgcgtacttcgactggtcgatgatcgcccgcgagtacgcccgcgcgcgc
ggcaccgcgccggtgcggcagcggctgtgcaccatggcgctggccagggaactggcgctg
ccgctgcccaacatgaagctggagtcgctcgccgcccacttcggcgtccggcagcggcag
gcccacaacgccctcgacgacgcgcgggtgctggccgaggcgttccggccgagcctgcac
gcggcggccaagcggggcgtgcggctgccgctgctggagtgccggccgctcaccgagtgg
tcggcggcgcccggcgggggcgcgtcccggatcggccgtcaggccggtgcccggtccggc
ggctggcgcccgtcgcgcaggcgtccggcgtgcccgtaccccaaccccggccggtacgag
ccggacaaaccactcaagcagggcatgcgggtggccttctcgggtgacacctccgtggag
cgggagctgctggaggaccgggccgtcgaggcgggcctgcacgtcgcgacgagcgtctcc
cggctgaccagcctgctggtcagcaacgacccggacgcggtgacctcgaaggtggccaag
gcgaaggcgttcggcacgcccgtggtggacgaggtggccttcacccatctgctgcgggac
gtcgccccggccgacggctga
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