Streptomyces fradiae: CP974_10000
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Entry
CP974_10000 CDS
T07648
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sfb
Streptomyces fradiae
Pathway
sfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP974_10000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfb03400
]
CP974_10000
Enzymes [BR:
sfb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CP974_10000
DNA repair and recombination proteins [BR:
sfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP974_10000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
TraI_hel_assoc_N
PhoH
AAA_16
PIF1
NPHP3_N
HTH_IclR
UvrD_C
AAA
nSTAND3
SLFN-g3_helicase
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QEV12306
LinkDB
All DBs
Position
complement(2238863..2241094)
Genome browser
AA seq
743 aa
AA seq
DB search
MSQMAVVEGVLERITYSNDETGYTVARVDTGRGGGELLTVVGSLLGAQPGESLRMEGRWG
SHPQYGRQFTVENYTTLLPATIQGIRRYLGSGLIKGIGPRMADRITEHFGTDTLDVIEHE
PQRLVEVPGLGPKRTRMIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKQYGDASVSVV
RNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPDRAKAGLRHALSQSADQGHCFLPEERL
IADAVKLLQVDTGLVIDCLAELAADEEEGGIVRERVPGPDGEPVTGVFLLPFHRAEVSLA
AAVGRLMRADEDRMAAFRDVAWDKALAWLADRTGAELAPEQEAAVRLALTRKVAVLTGGP
GCGKSFTVRSVVELARAKRAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAY
DRDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGQVLGDLLA
PGSPVPSVRLTRIFRQAQKSGVVTNAHRINKGEYPVTSGLPDFFHFVAEDTEEAGRLTVD
VAARRVPARFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAVTPARPGLPEKRFGGRVFR
VGDKVTQIRNNYEKGANGVFNGTVGVVTALDADEQRLTVLTDEDEEVPYDFDELDELAHA
YAVTIHRSQGSEYPAVVIPVTTSAWTMLQRNLLYTAVTRARKLVVLVGSRKALGQAVRTV
SAGRRFTALDHRLTGGRPVGNIT
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagatggcggtggtcgagggcgtcctcgaacggatcacgtacagcaacgacgag
accgggtacacggtcgcccgcgtcgacacggggcgcggcggcggcgaactgctcaccgtc
gtcggctcgctgctcggcgcgcagccgggggagtcgctgcggatggagggccgctggggc
tcccacccgcagtatgggcggcagttcacagtggagaactacacgacgctgctgcccgcg
acgatccagggcatccggcgctacctgggctccgggctgatcaagggcatcggcccgcgc
atggccgaccggatcacggagcacttcggcacggacacgctcgacgtcatcgagcacgag
ccgcagcgcctcgtggaggtgcccggcctcgggccgaagcgcacccgcatgatcggcgcc
gcgtgggaggagcagaaggcgatcaaggaggtgatggtcttcctccagggcgtcggggtg
tccacctcgatcgcggtgcggatctacaagcagtacggcgacgcgtcggtctccgtcgtg
cggaaccagccgtaccggctcgccgccgacgtgtggggcatcggcttcctcaccgccgac
cgcatcgcgcaggccgtcgggataccccacgacagtcccgaccgcgccaaggcggggctg
cggcacgccctgtcccagtcggccgaccaggggcactgcttcctgcccgaggagcggctg
atcgccgacgcggtcaagctgctccaggtcgacaccggcctggtcatcgactgcctcgcc
gagctggcggcggacgaggaggagggcgggatcgtgcgggagcgcgtgcccggcccggac
ggcgagccggtcacgggggtgttcctgctgccgttccaccgcgcggaggtgtccctcgcc
gcggcggtcgggcggctgatgcgggccgacgaggaccggatggcggccttccgggacgtc
gcctgggacaaggcgctggcgtggctcgcggaccgcacgggggcggagctggcgcccgag
caggaggcggccgtgcgcctcgccctcacccggaaggtcgccgtgctgaccggcgggccc
ggctgcggcaagtcgttcacggtgcggtcggtggtggagctggcgcgcgccaagcgggcg
aaggtggtgctggccgcgccgaccggccgggcggcgaagcggctcgcggagctgaccggc
gccgaggcgtccacggtgcaccggctgctggagctgaagccgggcggggacgcggcgtac
gaccgggaccggccgctggacgcggacctggtggtggtcgacgaggcgtcgatgctggac
ctgctgctggcgaacaagctggtcaaggccgtcgcgccgggggcgcacctgctgctggtg
ggggacgtggaccagttgccgagcgtcggcgcggggcaggtgctcggggatctgctggcg
ccgggcagcccggtcccgtcggtgcggctcacccggatcttccggcaggcgcagaagtcg
ggcgtcgtcaccaacgcccaccggatcaacaagggggagtacccggtcaccagcgggctg
ccggacttcttccacttcgtggccgaggacacggaggaggccggcaggctgacggtggac
gtggccgcccggcgcgtccccgcccggttcggcctcgacccgcgccgggacgtgcaggtc
ctggcgcccatgcaccgcggcccggccggggcgggcacgctcaacgggctgctccagcag
gccgtcacgccggcccgccccggactgccggagaagcggttcggcggccgggtcttccgc
gtcggcgacaaggtgacgcagatccgcaacaactacgagaagggcgccaacggcgtcttc
aacggcacggtcggggtggtcaccgccctcgacgcggacgagcagcggctgacggtgctg
accgacgaggacgaggaggtgccctacgacttcgacgagctggacgagctggcccacgcg
tacgccgtgacgatccaccgctcgcagggcagcgagtacccggccgtcgtgatcccggtc
acgacgagcgcgtggacgatgctccagcgcaacctcctctacacggccgtcacccgcgcc
cggaagctcgtcgtcctcgtcggttcgcgcaaggcgctcgggcaggccgtccgcacggtt
tccgccggtcggcgctttaccgcactcgatcaccggctgacaggaggacgccccgtggga
aacatcacctag
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