Streptomyces fradiae: CP974_13325
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Entry
CP974_13325 CDS
T07648
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sfb
Streptomyces fradiae
Brite
KEGG Orthology (KO) [BR:
sfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfb03016
]
CP974_13325 (thpR)
Enzymes [BR:
sfb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CP974_13325 (thpR)
Transfer RNA biogenesis [BR:
sfb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CP974_13325 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QEV12824
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All DBs
Position
3013220..3013801
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AA seq
193 aa
AA seq
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MRLFAAVLPPPAAVEELAALVGELRRMPGADALRWTGRPSWHYTLAFMGEVDEAVLPELS
ERLGRAAHRTPPFPLRVHGGGRFGRRALWAGAAGGLDDMRLLAERSDAAARRSGVAMEEP
RRYQPHLTLARSRADADLRPFVEALEHFRGSRWEVAALDLVRSNPPAPGVPGEAPRYETL
ATWPLGGPAPGAG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttcgccgccgtactgccgccgcccgcggcggtcgaggaactggccgccctg
gtgggggagctgcggaggatgccgggcgcggacgcgctgcgctggacgggccgcccgagc
tggcactacacgctggcgttcatgggcgaggtggacgaggccgtcctgcccgagctgtcg
gagcggctcggccgcgccgcgcaccgcacgccgccgttcccgctgcgcgtccacgggggc
gggcggttcggccgccgcgccctgtgggccggcgcggcgggcggcctcgacgacatgcgg
ctgctcgcggagcgctccgacgcggcggcccggcgctcgggcgtcgcgatggaggagccc
cgccggtaccagccccacctcacgctcgcccgcagccgcgccgacgcggacctgcggccg
ttcgtcgaggcgctggagcacttccggggtagccgctgggaggtcgccgcgctggacctg
gtccgcagcaacccgcccgcccccggggtgccgggcgaggcgccccgctacgagacgctc
gccacgtggcccctgggcgggccggccccgggggccggttaa
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