Streptomyces fradiae: CP974_15300
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Entry
CP974_15300 CDS
T07648
Name
(GenBank) PAS domain-containing protein
Organism
sfb
Streptomyces fradiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_8
PAS_4
Response_reg
Diguanyl_cycl_sensor
Nup54
DUF4455
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QEV13132
LinkDB
All DBs
Position
complement(3450218..3454993)
Genome browser
AA seq
1591 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDGLVLVNTNGTVVNANTIALEMFETPGTALVGRGLLDLLP
AFDSRLIPGSMRRPEGADSLGRTKPTRMVARRTDGGEFPVEVTSAGLEDGREAYDSYGPT
SYSGDELLMIVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRIVLVNPAAA
QILGWRASDLGGKELHPLMLHSRADGEPFPYDESPLADTLRSGRKHRVRGQVVWAKDGSA
VPVDLTTAPVRDGDQLVGAVMTFADRRPYEQLAEEHADRLAALAEKHEAETARLTEKHEA
ETAGLAERHRAEAAAYEERLAEAAERYESLAAHHRQLAAVLGGSLRGPLEELRRELGTLA
ADPAGQLWPEANQILHHLAAGYARMTTLVDNVLGFQRLDTGEEELRKEPVLLDAVVASGL
DGAVELIGPGRAQFAVHAPPIEAEVDGVRLATALAHLVADVAGVDSTGKARIVAGGGYAD
STVVVAAAQRGEVVRIEVRGPYAGGDPVHEPIVRGIVRAHGGVLQTHEVPGMNGSAYVLE
VPLGAGGGTAPTAAAGSGTGADAGADAAGPGAASPAGGAAGGGSGLVSDGATGGGPAGVA
GPAPDGASSGGASSGGTAAGPAGVHAGASAGDGGVPGGSGVSGGSGAVAGGGAAVALPAQ
QSRPGAGAVPGAGADEAPPGGGRRRARRASTDAFLDSPVRAEDPVAPPPTGRRRAAAPAG
DTAGEQRLVPAQDSGGAEPTGRRRGRPSPVEAAPAEGSVVTAAESAQARPVALGDTVPPQ
GVAPAEDGAPGGGRRARRGPAGQEGAVPALPPAPVPAQGPAQGPASTPAGRRARRALATG
QERATGATAEGTGRAAFALPPAEADRAPAGRPAHPAQAQAQAQAQVQAQAQSAGPEARPA
APRAVPQARIAAPVEESRHDAVRTVPGADHTPPQPHPMPIAPQAPVPGAPVPGAPMPGAP
VPGVPAASPAIAVPPLGGPEAAGGSAAPATETTPGASVPPGAGAAPAIPVPPGPPVAPGD
TAVPPGTAGAPVPTGAPVPTGAPVPPGTPGAPVVPEAPAVPVPPGVHPAAGTAAPGSARV
PAPAGPSGTAGPAGPTGPGDTAPRRPDPAAGAVTPEIPPSAAEPSPTAPASPPAVPTGRR
RAVAPPAPAGPAPTAAPGASADGPAAEGVPADASATQGRAFSVRTLGQGVPFTPPSAGGA
PTPAHGTGTGSGRRRKLATPPDIEPQPSPDATAVPPAAQQAGRPPAAPRPPAPPVPGAAP
PATPQGTAPAATPPGAPQPVTPQSSAPAPVPHAPSAPPGQQLLAAPAPEGRAYEIGAPDE
GADEGPEPLDGPGGAVEVANQPQPRPVDDELPPEPLDNPRRLLVWPAPDVDTQQALTDRG
YRPVIVHSREEVDAQIAAFPAALFVDPLTGPITRTALQSLRQAAVAAEVPVLLAAGLGQA
TREAAYGADPAVLLKALAPRDSEQHPSRVLLIEEHDEIAHALTAALERRGMRVQRAAADS
EAVALATQLPPNLVVMDLMQVRRRRAGIIDWLRANGHLNRTPLVVYTSAGLEEADLPRLA
SGETVLFLAERSTSPEVQSRIVDLLAKIGTN
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactcgacgccctgccc
gacgggctcgtcctcgtcaacaccaacggcacggtcgtcaacgccaacaccatcgcgctc
gagatgttcgagacgcccggcacggcactggtggggcgggggctgctcgacctgctgccc
gcgttcgactcgcggctcatccccggctccatgcgcaggcccgagggggccgactcgctg
ggccgcaccaagccgacccgcatggtcgcccggcggacggacggcggcgagttccccgtc
gaggtcaccagcgccgggctggaggacggccgcgaggcgtacgactcgtacggccccacc
tcctacagcggcgacgaactgctgatgatcgtcgtccgcgacctgtccggcaccgtcgac
accgaggcggagctggcccgctcgcagcggcagaccgagatgatcctgcgcgccgcctcc
gagggcgtcgtcggcacggacacggacgggcgcatcgtcctggtcaacccggccgccgcg
cagatcctcggctggcgggccagcgacctgggcggcaaggagctccacccgctgatgctg
cactcgcgggcggacggcgagccgttcccgtacgacgagtcgccgctcgcggacaccctc
cgctcggggcggaagcaccgcgtccgggggcaggtcgtctgggcgaaggacggttcggcc
gtccccgtggacctgacgaccgctccggtacgggacggggaccagctcgtcggcgccgtc
atgaccttcgcggaccgcaggccgtacgagcagctcgccgaggagcacgccgaccggctc
gcggcgctcgcggagaagcacgaggccgaaaccgcgcggctgaccgagaagcacgaggcc
gagacggccgggctggccgagaggcaccgggcggaggccgcggcgtacgaggagcggctc
gcggaggcggccgagcggtacgagtccctggccgcgcaccaccgccagctggccgccgtc
ctgggcggctcgctgcgcgggccgctggaggagctgcgccgtgagctgggcaccctcgcg
gcggacccggccggacagctgtggccggaggcgaaccagatcctgcaccacctcgccgcc
gggtacgcccggatgacgacgctcgtcgacaacgtcctcggcttccagcgactcgacacg
ggcgaggaggagctgcgcaaggaaccggtcctgctcgacgcggtcgtcgcgagcggtctc
gacggcgcggtcgagctgatcgggccggggcgggcgcagttcgcggtgcacgcgccgccc
atcgaggcggaggtcgacggcgtgcgcctcgccacggccctcgcccacctggtcgccgac
gtggccggggtcgactccacgggcaaggcccggatcgtcgcgggcggcgggtacgccgac
tcgacggtcgtggtggccgcggcccagcgcggcgaggtcgtacggatcgaggtgcgcggg
ccgtacgcgggcggcgacccggtgcacgagccgatcgtgcggggcatcgtccgggcgcac
ggcggggtgctccagacgcacgaggtgccgggcatgaacggcagcgcgtacgtcctggag
gtcccgctgggcgcgggcggcgggaccgcgccgacggccgccgccgggtcgggcacgggg
gcggatgccggggcggatgccgccggcccgggggcggcaagccctgcgggcggggctgcg
ggcggtggttcgggcctggtctcggacggggcgacgggcggtggcccggccggggtcgcc
ggtccggctccggacggtgcttcttcgggcggtgcctcttcgggtggtacggccgctggt
ccggcgggagttcacgcgggtgcttcggccggggacggcggcgtccccggtgggtccggc
gtttccggtgggtccggcgctgtggcgggtggcggtgccgccgtcgcactgcccgcccag
cagtcgcggccgggggccggtgcggtgcccggtgccggtgcggacgaggcccctccgggt
ggcgggcgccgacgtgcccggcgggcgtcgacggacgcgttcctcgacagtccggtgcgc
gcggaggaccccgtggcgcccccgccgaccgggcggcgccgcgccgccgcgcccgccggg
gacacggcgggtgagcagcgactcgtacccgcccaggactccggcggcgccgaaccgacc
ggtcggcgtcgcgggcggcccagcccggtggaggccgcgccggcggagggctccgtcgtg
acggccgccgagtcggcgcaggcccggccggtggcgctcggggacaccgttccgccgcag
ggcgtcgccccggcggaggacggcgcgccgggcggtgggcgccgtgcccggcgcggcccg
gccggccaggagggcgccgtaccggccttgccgcccgcgcccgttccggcgcaggggccg
gcgcaggggccggcgtccacgcctgccgggcgccgtgcgcgccgggcgctcgcgacgggc
caggaacgcgccaccggggccacagccgagggcacggggcgggcggccttcgcgctgccc
ccggccgaggcggaccgcgccccggccggccggcccgcgcacccggcccaggcccaagcc
caggcccaagcccaggtccaggcccaggcccagtcggccggtcctgaagcccggccggcc
gccccgcgggccgttccgcaggcccggatcgccgcgccggtcgaggagagccgccacgac
gccgtccgtacggtgccgggcgcggaccacacaccgccgcagccccacccgatgcccatc
gcaccgcaggctccggtgcccggcgctccggtgcccggcgccccgatgccgggcgctccg
gtgccgggtgtacccgccgcgtccccggccatcgccgtaccgcccctcggcggccccgag
gccgcgggcggcagcgccgcgcccgctacggagacgacgcctggtgcctctgtgcctccc
ggtgcgggagcggcacccgccatccccgtgcccccgggcccccctgtagcaccaggtgac
accgctgtcccgccgggcaccgcaggcgcccccgtaccgaccggcgcccccgtaccgacc
ggcgcccccgtaccgcccggcacgcccggcgcccctgtggttcccgaagcgcccgccgtc
cccgtgccgccgggcgtccacccggcagccggtacagccgcgcccggctccgcgcgggtt
cccgcacccgccggcccttccgggaccgctggacccgcgggacccaccggtcccggcgac
accgcgccgcggcggcccgacccggcggccggcgccgtcacgccggagatcccgccgagc
gcggccgagccgagccccaccgcgcccgcgtccccgcccgccgtgcccaccggccgccgc
cgcgcggtggcgcccccggcaccggcgggaccggcgcccaccgccgcgcccggtgcgtcg
gccgacggcccggccgccgagggtgtgcccgccgatgcgtcggccacccagggacgggcg
ttcagcgtgcgcaccctcggccagggcgtgccgttcaccccgccgtccgccgggggcgcc
ccgacacccgcccacggcaccgggaccggttccggacgccggcgcaagctggccacgccc
ccggacatcgagccgcagccgtcacccgacgcgacagccgttcccccggccgcacagcag
gccggccgaccaccggcggccccgcgcccgcccgccccgccggtccccggcgcggcgccc
ccggccaccccgcagggcaccgcacccgcggccaccccgccgggcgcaccccagccggtt
acgccccagtccagcgcccccgcgccggtgccgcatgccccctccgcgccccccggccag
cagcttctcgcggcacccgcccccgagggccgtgcctacgagataggggcaccggacgaa
ggcgccgacgagggcccggagccgctggacggaccgggtggcgccgtggaggtggccaac
cagccgcagccgcgaccggtcgacgacgagctgccgccggagccgctggacaacccgcgc
cgcctcctggtgtggccagcgccggacgtggacacgcagcaggcgctgaccgaccggggc
taccggccggtgatcgtgcactcccgcgaggaggtcgacgcgcagatcgccgcgttcccc
gcggccctgttcgtcgacccgctgaccgggccgatcacccgcacggcgctccagtcgctg
cgccaggcggcggtggcggccgaggtgccggtgctgctggcggccgggctgggccaggcc
acccgcgaggccgcgtacggcgccgaccccgccgtgctcctcaaggccctggcgccgcgc
gacagcgagcagcacccgtcgcgggtcctgctgatcgaggagcacgacgagatcgcccac
gcgctgacggccgccctggagcggcgcggcatgcgggtgcagcgcgcggccgcggacagc
gaggccgtcgcgctcgccacgcagctcccgccgaacctcgtcgtcatggacctgatgcag
gtgcggcgccgccgggccgggatcatcgactggctgcgcgccaacggccacctgaaccgc
acgccgctggtcgtctacacgtcggcgggcctggaggaggcggacctgccgcggctggcg
tccggggagaccgtgctgttcctcgctgagcggtccacgagcccggaggtgcagtcgcgg
atcgtcgacctgctcgcgaagatcggcacgaactag
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