Streptomyces fradiae: CP974_22990
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Entry
CP974_22990 CDS
T07648
Name
(GenBank) HAMP domain-containing protein
Organism
sfb
Streptomyces fradiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
ATG17_like
CovS-like_HAMP
Baculo_PEP_C
Med21
Motif
Other DBs
NCBI-ProteinID:
QEV15952
LinkDB
All DBs
Position
5130479..5136004
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AA seq
1841 aa
AA seq
DB search
MDAAALERLLGALTAMRDGNFRRRLTVTGEGPMAEIAAVFNEVADRKLHLTGELARVRRV
VGREGKLSERLEVGASEGAWATAIEAANALVDDLTRPVSEVGRVLSAVADGDLEQRMELR
SEGPDGAGRPLRGEFLKVARTVNNLVDQLSSFTDEVTRVALEVGTEGKLGGQAQVRGVSG
SWKDLTDSVNTMAYRLTAQVRDIALVTTAVAKGDLSRKVTVHVAGEMLELKNTVNTMVDQ
LSSFSSEVTRVAREVGTEGKLGGQAEVPGVAGVWKDLTDSVNTMAGNLTSQVRGIAEVTT
AVANGDLSQKVRVSARGEVAQLADTINQMTETLRTFADEVTRVAREVGVEGLLGGQAQVP
GAAGTWKDLTDSVNTAFRNLTGQVRDIAQVTTAVANGDLSQKVTVDVAGEMLELKNTVNT
MVDQLSAFGSEVTRVAREVGVEGRLGGQAEVRGAAGTWKDLTDSVNTAFRNLTGQVRDIA
QVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVAQLSSFADQVTRMARDVGTEGRLGGQ
ARVPGVSGTWKELTDSVNFMAGNLTSQVRQIAQVTTAVARGDLSQKIDVDARGEILELKN
TINTMVDQLSAFAEQVTRVAREVGTDGRLGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQV
RNIAQVATAVARGDLSQKIDVDARGEILELKNTLNTMVDQLSNFAEQVTRVAREVGTEGR
LGGQAEVQGVSGTWKDLTQSVNFMASNLTSQVRQIAQVTTAVAKGDLSKKITVDARGEIL
DLVTTVNTMVDQLSNFADEVTRVAREVGTEGILGGQARVRGVTGIWKDLSDNVNVMANNL
TSQVRNISRVSSAVANGDLTKKVTVEARGEVAELADTVNTMVTTLSSFADEVTRVAREVG
TEGELGGQAHVPGVSGTWKDLTESVNSMASNLTGQVRQIAAVTTAIAKGDLTKKIDIDAR
GEIQELKNTINTMVDQLSSFAEEVTRVAREAGTEGILGGQARVRDVDGTWRDLTESVNEM
AGNLTRQVRAIAAVATAVTRGDLNLKIDVDASGEIQVLQDNINTMIANLRDTTLANEEQD
WLKGNLARISGLMQGRRDLDDVASLIMSELTPVVSAQHGAFFLALPAGGGSAEPGGEDDG
AYELRMRASYGYSAGSMPTSFRPGETLIGTAAEEKRTIQVNVPPGYLKISSGLGEAAPAH
VIVLPVLFEGKVLGVIELASFQPFTQIQRDFLNQIAEMIATSVNTISVNSKTEVLLKQSQ
ELTEQLRERSAELENRQKALQDSNAELEEKAELLARQNRDIEVKNTEIEEARQVLEERAE
QLAVSMRYKSEFLANMSHELRTPLNSLLILAKLLADNADGNLSPKQVEFAETIHGAGSDL
LQLINDILDLSKVEAGKMDVSPTRIALVQLVDYVEATFRPLTAEKGLDFSVRVSPELPAT
LHTDEQRLLQVLRNLLSNAVKFTDSGAVELVIRPAKADVPASIREQLLEAGSLRDPDAEL
IAFSVTDTGIGIAASKMRVIFEAFKQADGTTSRKYGGTGLGLSISREIARLLGGEIHAAS
EPGRGSTFTLYLPLHGNELPPHGYGSAAGAAQDAHAAGAEGGPGTGSGAEAAEGAPEERG
TALPAAPAAPVGHVAPAPSAPQPPGRGAPAGGTGPGESGRNGTGALFRHRRRASAAAEGR
AEGGGRRETGAGPDSGRDAGAEAAGQEAAEPRRPIRFSGEKVLIVDDDIRNVFALTSVLE
QHGLSVLYAENGREGIEVLEQHDDAAVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIAL
TAKAMKGDREKAIESGASDYVTKPVDPDHLLSVMDQWMHGK
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccgctgcactggagcggctgctgggtgccctgacggcgatgcgggacggcaac
ttccgcaggcggctgacggtcaccggtgaggggccgatggcggagatcgccgccgtcttc
aacgaggtcgccgaccgcaagctgcacctcacgggcgagctggcgcgggtgcgccgggtc
gtggggcgtgaggggaagctgtcggagcggctggaggtgggcgccagcgagggcgcctgg
gcgaccgcgatcgaggccgccaacgcgctggtggacgacctgacgaggccggtctccgag
gtggggcgggtcctgtcggccgtcgcggacggcgacctggagcagcggatggagctgcgc
tccgaggggcccgacggggcggggcgtccgctgcgcggtgagttcctgaaggtggcccgt
acggtcaacaacctcgtcgaccagctgtcgtcgttcaccgacgaggtgacccgcgtcgcg
ctcgaagtcggtacggagggcaagctgggcgggcaggcccaggtgcgcggggtgtccggt
tcgtggaaggacctcacggactcggtcaacacgatggcgtaccggctcaccgcccaggtg
cgggacatcgcgctggtcaccacggcggtcgccaagggcgatctgtcgcggaaggtcacg
gtgcacgtggccggggagatgctggagctgaagaacaccgtcaacacgatggtggaccag
ctgtcgtcgttctcgtccgaggtgacgcgcgtcgcgcgcgaggtgggcacggagggcaag
ctcggcgggcaggccgaggtgccgggcgtggccggggtctggaaggacctcaccgactcc
gtcaacacgatggcgggcaacctcacctcgcaggtgcgcggcatcgccgaggtcaccacc
gccgtcgccaacggggacctgtcgcagaaggtccgggtcagcgcgcgcggcgaggtcgcg
cagctggcggacaccatcaaccagatgaccgagacgctgcgcaccttcgccgacgaggtg
acgcgggtcgcgcgggaggtgggtgtcgaggggctgctgggcggtcaggcgcaggtgccg
ggcgcggccggtacgtggaaggacctgacggactcggtcaacacggcgttccggaacctg
acgggtcaggtgcgggacatcgcgcaggtgacgacggcggtggccaacggcgacctgtcg
cagaaggtcacggtcgacgtggccggcgagatgctcgagttgaagaacaccgtgaacacg
atggtggatcagctctccgcgttcggttccgaagtgacccgggtggcccgcgaggtgggc
gtcgagggccggctcggcggtcaggcggaggtgcgcggggcggcgggcacgtggaaggac
ctgacggactcggtcaacacggcgttccggaacctgacgggtcaggtgcgggacatcgcg
caggtgacgacggcggtggccaacggcgacctgtcgcagaaggtcacggtcgacgtggcc
ggcgagatgctggagctgaagaacaccgtcaacacgatggtggcgcagctgtcgtccttc
gccgaccaggtgacgcgcatggcgcgggacgtgggcacggaggggcggctgggcggtcag
gcgcgcgtaccgggggtgtcgggtacgtggaaggagctcaccgactccgtcaacttcatg
gcggggaacctgacgtcccaggtgcggcagatcgcgcaggtgacgacggcggtggcgcgc
ggtgacctgtcgcagaagatcgacgtggacgcgcgcggcgagatcctggagctgaagaac
accatcaacacgatggtcgaccagctgtccgcgttcgccgagcaggtgacgcgggtggcc
cgcgaggtgggcaccgacgggcggctgggcggtcaggcgcaggtgcccggtgtggccggg
gtgtggcgcgatctgacggactccgtgaacggcatggccggcaacctcaccgcgcaggtc
cgcaacatcgcgcaggtggccacggcggtggcgcgcggtgacctgtcgcagaagatcgac
gtggacgcgcgcggcgagatcctggagctgaagaacaccctcaacacgatggtggaccag
ctgtcgaacttcgccgagcaggtgacgcgggtcgcccgcgaggtgggtacggagggccgc
ctcggcggtcaggccgaggtgcagggcgtctccggcacctggaaggacctgacgcagtcg
gtcaacttcatggcgagcaacctgacctcgcaggtgcggcagatcgcccaggtgacgacg
gcggtcgccaagggcgacctgtcgaagaagatcaccgtcgacgcccggggcgagatcctc
gacctggtcaccacggtcaacacgatggtggaccagctctcgaacttcgcggacgaggtc
acccgggtggcgcgcgaggtgggcaccgagggcatcctcggcggccaggcgcgggtgcgc
ggcgtgacgggcatctggaaggacctcagcgacaacgtcaacgtgatggcgaacaacctc
acctcgcaggtgcggaacatctcgcgggtgtcgtcggcggtggccaacggcgacctgacg
aagaaggtgaccgtcgaggcgcgcggtgaggtcgcggagctggccgacacggtcaacacg
atggtgacgaccctgtcgtcgttcgcggacgaggtcacgcgggtggcgcgcgaggtgggt
accgagggcgaactgggcggccaggcgcacgtgccgggggtgtcgggcacgtggaaggac
ctcaccgagtcggtgaactcgatggcgtcgaacctgaccggtcaggtgcggcagatcgcg
gccgtgaccacggccatcgccaagggcgacctgaccaagaagatcgacatcgacgcgcgc
ggtgagatccaggagctgaagaacaccatcaacacgatggtcgaccagctgtcgtcgttc
gccgaggaggtcacccgcgtcgcgcgggaggcgggcacggagggcatcctcggcggtcag
gcgcgggtgcgggacgtcgacggcacctggcgggacctcaccgagtcggtgaacgagatg
gccgggaacctgacgcggcaggtgcgcgccatcgcggccgtggccacggcggtgaccagg
ggcgatctcaacctgaagatcgacgtggacgcgtcgggtgagatccaggtactccaggac
aacatcaacacgatgatcgccaacctgcgcgacacgaccctcgccaacgaggagcaggac
tggctgaagggcaatctggcgcgcatctccggtctgatgcagggccgcagggacctggac
gacgtcgcctcgctgatcatgagcgagctgacgccggtggtgtccgcgcagcacggcgcc
ttcttcctggccctgccggcgggcggcgggtcggcggagccgggcggggaggacgacggg
gcgtacgagctgcggatgagggccagctacggctactcggccgggtcgatgccgacgtcg
ttccggccgggggagacgctgatcgggacggccgccgaggagaagcggacgatccaggtg
aacgtcccgccggggtacctgaagatctcgtcggggctgggggaggccgcgccggcgcat
gtgatcgtccttccggtgctgttcgaggggaaggtgctcggggtgatcgagctggcgtcg
ttccagccgttcacgcagatccagcgggacttcctcaaccagatcgccgagatgatcgcg
accagcgtcaacacgatcagcgtcaactccaagacggaggtgctgctgaagcagtcgcag
gagctgaccgagcagctgcgggagcgttcggcggagctggagaaccgtcagaaggccctg
caggactccaacgcggagctggaggagaaggccgagctgctggcgcggcagaaccgcgac
atcgaggtgaagaacaccgagatcgaggaggcccggcaggtgctggaggagcgcgcggag
cagctcgccgtctccatgcgctacaagtccgagttcctggcgaacatgtcgcacgagctg
cgcaccccgctcaactcgctgctgatcctggcgaagctgctggcggacaacgcggacggc
aacctgtcgccgaagcaggtcgagttcgccgagacgatccacggcgcgggctccgacctg
ctccagctgatcaacgacatcctggacctgtcgaaggtcgaggccggcaagatggacgtc
agcccgacacggatcgcgctggtgcagctggtggactacgtggaggccacgttccgcccg
ctgaccgcggagaaggggctggacttctccgtgcgggtctccccggagctgccggcgacc
ctccacacggacgagcagcgtctcctgcaggtgctgcgcaacctcctgtcgaacgcggtg
aagttcaccgactccggcgcggtggagctggtcatccgcccggcgaaggcggacgtgccg
gcgtcgatccgggagcagctgctggaggccggttcgctgcgggacccggacgccgagctg
atcgcgttctcggtgaccgacacgggcatcggcatcgcggcgagcaagatgcgggtcatc
ttcgaggcgttcaagcaggcggacggcacgacgagccgcaagtacggcggtacgggcctg
gggctgtccatcagccgggagatcgcccggctgctgggcggcgagatccacgcggccagc
gagccgggccgcggttcgaccttcacgctgtacctgccgctgcacggcaacgaactgccg
ccgcacgggtacggctccgcggccggggcggcgcaggacgcgcacgcggccggggccgag
ggcggtcctggtacggggtccggggcggaggcggcggagggtgcgccggaggagcggggg
acggcgctgccggccgcgcccgccgcgccggtggggcacgtggcgccggcgccgtccgcc
ccgcagccgccgggtcgcggggccccggcgggcggtacggggccgggggagagcggacgg
aacggtacgggcgcgctgttccggcaccgccgcagggcgtccgccgcggcggagggccgc
gcagagggcggcggccggcgggagaccggggcggggccggactcgggccgggacgcgggt
gcggaggcggccgggcaggaggcggccgagccgcgccggccgatccgcttcagcggcgag
aaggtgctgatcgtcgacgacgacatccgcaacgtcttcgcgctcaccagcgtgctggag
cagcacggcctgtcggtgctgtacgcggagaacggacgcgagggcatcgaggtcctggag
cagcacgacgacgccgcggtggtgctgatggacatcatgatgccggagatggacgggtac
gcgacgacgaccgcgatccgcaggatgccgcagttcgcgggcctgccgatcatcgcgctg
accgcgaaggcgatgaagggcgaccgggagaaggcgatcgaatccggggcgtcggattac
gtcaccaagccggtcgaccccgatcatctgctctccgtgatggatcagtggatgcacgga
aagtga
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